runxuan
@runxuan
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Machine learning PhD turned computational biologist working on Omics
Dundee, Scotland
Joined December 2008
Build the next generation of AI for science. Two funded PhDs + industry placements (Syngenta/AHDB) using LLM-like models + AlphaFold-style protein AI. ML skills only—no biology.@JamesHuttonInst @Syngenta @TheAHDB
https://t.co/95pKlOYaEY
https://t.co/fjM2tr7Nj7
#AI #PhD
findaphd.com
PhD Project - BARIToNE: Identification of key gene for better barley using AI protein structure modelling (Project code 25E) at University of Dundee, listed on FindAPhD.com
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Excited to share our latest work on the barley pan-transcriptome and its role in understanding functional diversification across genotypes! https://t.co/TCcqbGOsjX
nature.com
Nature Genetics - A long- and short-read barley pan-transcriptome assembled from 20 diverse barley genotypes offers insights into genotype- and tissue-dependent gene expression and function.
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Only a few days left until the deadline—be sure to submit your application on time!
PhD Opportunity: Join a dynamic computational biology team using cutting-edge AI to improve crops! Gain expertise, collaborate globally, &make an impact. Women & underrepresented candidates encouraged. 🌍 Runxuan.zhang@hutton.ac.uk. Apply: https://t.co/GcBkisgrSa (Project 25E)🌾
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Unlock deeper insights from your RNA-seq data with the power of 3D RNA-seq from SHaRP Genomic Analytics! Visit us at Booth 612 at PAG, now through Tuesday, January 15th. https://t.co/FGlTkkZlWO
linkedin.com
We’re @pagmeeting #pag32 in #sandiego to demo #3Drnaseq software. Visit us at booth 612!
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Don’t miss this exciting opportunity—apply now for our funded PhD projects and take the first step toward groundbreaking research and career growth!
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Thrilled to be attending PAG (Booth 612) as an exhibitor for the first time! If you’re in San Diego from Jan 10th to 15th, stop by and let’s chat! https://t.co/A8Db0P5BKO
linkedin.com
PAG32 - see you there? From January 10th to 15th, 2025, we’ll be exhibiting at the Plant and Animal Genome Conference (Booth 612) and would love to see some of you there! We’ll have demos of the...
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Finally out! It has been a lot of fun working with AI scientists ( Dr Ke Li’s group @UniofExeter). It is just the beginning😊More interesting discoveries are on the way😉 @JohnInnesCentre @HaopengYu
NEWS - Breakthrough AI model can translate the language of plant life Plant RNA-FM, a pioneering Artificial Intelligence (AI) model able to understand the genetic “language” pattern of plants, has been launched @YiliangDing @UniofExeter
https://t.co/Svw26xy0Op
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PhD Opportunity: Join a dynamic computational biology team using cutting-edge AI to improve crops! Gain expertise, collaborate globally, &make an impact. Women & underrepresented candidates encouraged. 🌍 Runxuan.zhang@hutton.ac.uk. Apply: https://t.co/GcBkisgrSa (Project 25E)🌾
findaphd.com
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Another great collaboration with @DrZoeWaller in developing a novel method for predicting DNA i-Motifs Via Machine Learning @Bibo00128791 @HaopengYu @JohnInnesCentre @ucl
biorxiv.org
i-Motifs (iMs), are secondary structures formed in cytosine-rich DNA sequences and are involved in multiple functions in the genome. Although putative iM forming sequences are widely distributed in...
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Please RT: I'm still recruiting for this @BBSRCWhiteRose DTP PhD in plant disease resistance/synthetic biology @BiologyatYork. Deadline is 7th Jan. Collaboration with the brilliant and fabulous @LichmanLab & @nicolabiologist! 4 yr fully funded UK/international students eligible
Cant wait to do this project with @nicolabiologist & @LichmanLab - if you are looking for a PhD in plant immunity/gene regulation/synthetic biology then this is for you! Fully-funded 4 year PhD @BiologyatYork with @BBSRCWhiteRose deadline Jan 7th 2024 https://t.co/FskachmzWi
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The application will be open for just over a week until Nov 30th. Feel free to get in touch if you have any questions. Thanks!
We are seeking a postdoctoral scientist working on innovative computational methods for proteomics data analysis funded by the BBSRC Pioneer Award. Please get in touch if you are interested. The application can be submitted through the link below: https://t.co/J38Ac1e2d9
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ChatGPT just received its biggest update yet: Custom GPT bots. A step-by-step tutorial to setup your research assistant in 15 minutes: 👇
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Thanks to new @BBSRC Pioneer Awards funding we’re working to shine a light on the “dark matter” hidden in the #proteins that help us improve and develop new #crops and unlock proteomics for others across animal and human health. #proeomics @runxuan More: https://t.co/dP38MhiCbd
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Join us! @SoCoBioDtp #PhD programme applications are now open
🌱Are you interested in climate change and how plants can adapt to stress?☀️ Fully funded @socobiodtp #PhD in my lab @biokent @UniKent in beautiful Canterbury (UK) Feel free to contact me to know more! https://t.co/irsl9oZKKs Deadline: 8th January 2024 RT🙏 1/n #scijob
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We're looking for a new colleague @SABE_latrobe and @plants4space - a Professorial position at the interface of plant molecular sciences and phenomics. Big things happening in ag and food @latrobe!
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We are seeking a postdoctoral scientist working on innovative computational methods for proteomics data analysis funded by the BBSRC Pioneer Award. Please get in touch if you are interested. The application can be submitted through the link below: https://t.co/J38Ac1e2d9
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Day one of our @LeibnizIPK @JamesHuttonInst Barley of the Future symposium included discussions on the Barley research toolbox, cell biology & molecular development and Barley-omics. Networking opportunities now 🍻#betterbarley
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We are seeking talented software engineers with a passion for cutting-edge technologies in the field of genomics. Potential to be a founding member of an exciting startup, this opportunity is not to be missed! @HuttonICS @JamesHuttonInst
https://t.co/c0vKYu9PVE
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An opening postdoc position in working a very cool collaborative project between Bologna's lab @BolognaLab and my lab. Please retweet🙏!
Are you interested in RNA-Protein complexes and RNA secondary structure? We are opening a postdoctoral position to determine the roles and the in vivo single molecule secondary structures of novel regions interacting with DCL1. If you are interested, contact us before 20.08.23!
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R fans! If you or your students want a gentle, free intro to R programming, check out "R for the Intimidated" by @bugsized (my favorite scientist). It was on @DataCamp (h/t @jtleek) but they removed it, so @bugsized put all 27 lessons on @youtube
youtube.com
R for the Intimidated is an online course geared towards teaching R to the most beginner of beginning programmers! It was originally produced in 2015 for the...
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