Protein Data Bank
@rcsbPDB
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An Information Portal for studying Biological Macromolecules
Joined May 2009
The new human reconstruction #Recon3D is now available that enables a three-dimensional view of gene variation in human #metabolism by incorporating ~13,000 protein structures from @rcsbPDB and detailed #SBML maps with #pathway layout, see @NatureBiotech
nature.com
Nature Biotechnology - Large-scale integration of metabolite and protein structural data with existing networks of human metabolism provides insights into gene function and how drugs affect...
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Very useful to have @PDBeurope protein structures mapped to UniProt isoforms and UniRef as well now thanks to SIFTS!
We've updated SIFTS- our joint project with @uniprot to maintain up-to-date cross-references in the PDB https://t.co/XSnNREE57C
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Our latest manuscript: Towards an efficient compression of 3D coordinates of macromolecular structures https://t.co/z8s68anqHg
journals.plos.org
The size and complexity of 3D macromolecular structures available in the Protein Data Bank is constantly growing. Current tools and file formats have reached limits of scalability. New compression...
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#biocuration2017 John Westbrook: "Unlike wine, data formats don't generally improve with age"
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our latest paper - Impact of genetic variation on three dimensional structure and function of proteins https://t.co/t8OGviKGyK
journals.plos.org
The Protein Data Bank (PDB; http://wwpdb.org) was established in 1971 as the first open access digital data resource in biology with seven protein structures as its initial holdings. The global PDB...
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"I was able to meet these colleagues for the 1st time because of the Hub..we now Skype every week!" - @buildmodels @ISBUSA #BDHubs #bigdata
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New guest blogpost from our #PrecisionMedicine spoke planning team @ISBUSA @buildmodels: https://t.co/NjeOeje9tq
#BDHubs #bigdata #NSFfunded
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Andreas @andorsch introduces #PrecisionMedicine #NSFfunded Spoke Planning Grant. Read more about the workshop: https://t.co/NjeOeje9tq
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We are hiring new post docs: 3D Visualization: https://t.co/rg6htvNaIM Machine Learning or Bioassemblies: https://t.co/3ZFVhnRTuB
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At the #BD2K All Hands meeting today. Visit us at Poster 113 for a demo of #mmtf_spec and NGL! #BD2K_AHM
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Join us for our workshop on precision medicine, gene variation, protein sequence, and 3D structure https://t.co/4xJ1CiCGbK
#genevariation3d
genevariation3d.org
A workshop to discuss interconnection of precision medicine, genetic variation data, protein sequence, and 3D structural information.
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Out latest paper: Integrating Genomic Info with Protein Sequence and 3D Atomic Level Structure at the @rcsbPDB
https://t.co/Tu99hNHYLe
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Learn about Scalable Visualization andMining of the PDB at this upcoming meeting: https://t.co/4XmbVpJsoC
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Wanna be in this pic? We're looking for a postdoc in scientific software development/structure bioinformatics in SD!
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Our summer interns! Projects include: faster 3D structural comparisons & clustering sequences with Big Data tech
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