MMTF @mmtf_spec X Profile

MMTF

@mmtf_spec

Followers

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The Macromolecular Transmission Format (MMTF) is a new compact binary format to transmit and store biomolecular structural data quickly and accurately.

San Diego, CA

Joined July 2016

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MMTF

@mmtf_spec

6 years

RT @peterwrose: Map mutations onto 3D protein structures, protein-protein/nucleic acid and protein-ligand/drug interactions in Jupyter Lab:….

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MMTF

@mmtf_spec

7 years

RT @samirelanduk: In the current version of atomium, parsing the ribosome structure 4BTS takes just under two hours. In the redesigned atom….

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MMTF

@mmtf_spec

7 years

#ISMB2018 Come to our poster: B-530: "Interactive Exploration, Data Mining, and Visualization of 3D Macromolecular Structures" and see a life demo how to mine the PDB in Jupyter Notebooks (July 9-10).

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MMTF

@mmtf_spec

7 years

RT @peterwrose: Try our Jupyter Notebook tutorials how to mine the Protein Data Bank: You can launch the notebooks….

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MMTF

@mmtf_spec

7 years

Presented about MMTF at NIH/NCI ITCR 2018 meeting.

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MMTF

@mmtf_spec

7 years

Felix and Mars working on the mmtf-pyspark online documentation (.

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MMTF

@mmtf_spec

7 years

Structural alignment group hacking away at the MMTF-2018 Hackathon.

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MMTF

@mmtf_spec

7 years

Getting ready for the MMTF-2018 Hackathon (

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MMTF

@mmtf_spec

7 years

RT @peterwrose: MMTF Workshop dinner at La Jolla Shores after a long day of tutorials.

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MMTF

@mmtf_spec

7 years

Nice find!

Spencer Bliven

@antidemagogue

7 years

Enjoying the #mmtf workshop @ UCSD. Fast filtering of the PDB revealed this old-timey car driving through our data.

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MMTF

@mmtf_spec

7 years

First day of the MMTF-2018 workshop at @SDSC_UCSD.

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MMTF

@mmtf_spec

7 years

CCG's PSILO now supports importing and exporting MMTF files.

CCG_MOE

@CCG_MOE

7 years

RELEASE - We are pleased to announce the new release of PSILO 2017.12. New capabilities include support for importing and exporting Macromolecular Transmission Format (MMTF) binary format files and support for SMTP server with authentication. More info @

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MMTF

@mmtf_spec

7 years

We are pleased to announce the second MMTF workshop: Scalable and Reproducible Structural Bioinformatics Workshop & Hackathon 2018, May 7 – 9, 2018 at @UCSanDiego . Apply now:.

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MMTF

@mmtf_spec

8 years

Just finished the first MMTF workshop; complete workshop courseware and code samples are available:

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MMTF

@mmtf_spec

8 years

#ChemDoodle 3D v3 now supports reading/writing/loading MMTF files, including bond orders:

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MMTF

@mmtf_spec

8 years

Structural Bioinformatics & 3D Visualization Workshop/Hackathon, UC San Diego, apply for free travel & accommodation

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MMTF

@mmtf_spec

8 years

#PLOSONE: Towards an efficient compression of 3D coordinates of macromolecular structures

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MMTF

@mmtf_spec

8 years

PyMOL release v1.8.6 now supports fast loading of PDB structures using the MMTF format (

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MMTF

@mmtf_spec

8 years

Thanks Stefan, Gabriel, Gerardo, Andrew, @TorstenSchwede for your visit to UCSD and work on MMTF-cpp encoder/decoder

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MMTF

@mmtf_spec

9 years

Postdoc position in Structural Bioinformatics/Big Data at UC San Diego. Apply now! #Bioinformatics #BD2K #peterwrose

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