QIIME 2
@qiime2
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Announcements, tech support, community & discussion can always be found on the QIIME 2 Forum (https://t.co/U2iHan1zR9).
Joined October 2015
Happy Monday! Start your week w/ a new QIIME 2 release: @qiime2 2024.2. New parallel shotgun actions, an updated visualizer for summarizing feature tables (see `summarize-plus`), performance enhancements & minor fixes throughout & a lot more. Enjoy! https://t.co/djhq7eff3f
forum.qiime2.org
The QIIME 2 2024.2 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: π As a reminder, our next planned QIIME 2 release is scheduled for May 2023 (QIIME 2...
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#QIIME2 2023.9 is now available! π Exciting updates include an alpha release of our shotgun #metagenomics distribution (πππ), fully integrated provenance replay within the framework, batched decontam analysis, and more! Thank you contributors!! π https://t.co/MDNUL3GOlH
forum.qiime2.org
The QIIME 2 2023.9 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: π As a reminder, our next planned QIIME 2 release is scheduled for December 2023...
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QIIME 2 2023.7 is now available and includes a new 'split' method in q2-feature-table, support for OutputCollections in Galaxy, a whole new packaging distribution system, various minor bug fixes, and much more! Thanks to all who contributed! π https://t.co/34j5XCPhjm
forum.qiime2.org
The QIIME 2 2023.7 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: π As a reminder, our next planned QIIME 2 release is scheduled for September 2023...
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@QIIME2 2023.5 is now available & includes new parallel computing support w @ParslProject, ability to resume failed pipeline runs, provenance replay, decontam actions, and much more. Thank you to all who contributed! #microbiome #bioinformatics
forum.qiime2.org
The QIIME 2 2023.5 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: π As a reminder, our next planned QIIME 2 release is scheduled for August 2023 (QIIME...
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We are very excited to make the @qiime2 toolkit for microbiome bioinformatics available on our cancer @galaxyproject server! This integration provides a graphical user interface for all QIIME2 tools plus connections b/t QIIME2 tools and the thousands of other tools in Galaxy
We're very excited to share that @qiime2 is now available on the public @galaxyproject server, https://t.co/PSFQRfcSpo, providing an easily accessible graphical interface for #microbiome #bioinformatics. More details at
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We're very excited to share that @qiime2 is now available on the public @galaxyproject server, https://t.co/PSFQRfcSpo, providing an easily accessible graphical interface for #microbiome #bioinformatics. More details at
forum.qiime2.org
Iβm excited to share that QIIME 2 is now accessible through the public Galaxy server, https://cancer.usegalaxy.org! Galaxy is a web-based platform for accessible, reproducible, and scalable biomedi...
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#QIIME 2 2023.2 is now live! Notable features include a diverging barplot visualizer for #ANCOM-BC results, a Proportional Engraftment of Donor Strains method and visualizer in q2-fmt, and misc bug fixes and improvements. Thanks to all contributors! https://t.co/utTL8iREI3
forum.qiime2.org
The QIIME 2 2023.2 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: π As a reminder, our next planned QIIME 2 release is scheduled for May 2023 (QIIME 2...
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Multi-amplicon microbiome data analysis pipelines for mixed orientation sequences using QIIME2: Assessing reference database, variable region and preprocessing bias in classification of mock bacterial community samples #Metagenomic #MicrobimeData @PLOSONE
https://t.co/De7C5o3vsi
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@QIIME2 2022.11 is live! Big new features inc artifact cache, improved diff abundance testing w ANCOM-BC, new usage examples, & more... Thanks to all contributors! Many exciting new #microbiome #bioinformatics features coming in 2023 - see you then! https://t.co/i2VUqnQIrL
forum.qiime2.org
The QIIME 2 2022.11 release is now available! Thanks to everyone involved for their hard work! :raised_hands:t3: π As a reminder, our next planned QIIME 2 release is scheduled for February 2023...
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Great collab @salkinstitute @Scripps_Ocean @KnightLabNews @GenomesLab @HaererAndreas @oysteroasis @mcdonadt @zackskel @Frable UG Joe Vechinski, Mike Shane, Antonio Gonzalez, Dani Perry, and Eric Allenβ¦from the deep sea to the surf zone !! New @qiime2 plug-in! Katharoseq
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Today's the day. The 2022 ISB Virtual Microbiome Series (#isbmicro22) begins in 90 minutes. Day 1 of our course features @thaasophobia walking through analyzing amplicon sequencing data with Qiime 2. You still have time to register! Join us! @gibbological
isbscience.org
On October 12 - 14, 2022, ISB will host a virtual course and symposium on global perspectives in microbiome research.
1000+ have registered! The 3-day ISB Virtual Microbiome Series starts TOMORROW & is FREE. This event perfect for grad students, postdocs, PIs, industry scientists, educators, clinicians, & anyone who is microbiome curious. Tell your friends! #isbmicro22
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q2-sapienns, a @qiime2 plugin for loading gene family, pathway, or taxonomy tables generated with #HUMAnN3 or #MetaPhlAn3 in #QIIME2 for downstream analysis, is now available #microbiome #bioinformatics
forum.qiime2.org
Hi all, I have recently been doing some analysis of shotgun metagenomics data and wanted to run some downstream QIIME 2 analyses, including supervised classification and ordination, on tables that I...
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The Caporaso Lab is hiring a Research Scientist. Come work on cutting edge #microbiome projects focused on #cancer, environmental #sustainability and more with the core @qiime2 development team!
forum.qiime2.org
Hi all, The Caporaso Lab at Northern Arizona University is looking to hire a Research Scientist. This individual will contribute to microbiome data analysis, writing, outreach and advising projects...
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We have finished uploading our @galaxyproject tools to the Toolshed for QIIME 2 2022.8! More info can be found here:
forum.qiime2.org
We have finished uploading our tools to the Galaxy Toolshed! You can install the core distribution by searching for suite_qiime2_core, or you can install each plugin suite individually. It is also...
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