Paul Pavlidis
@paulpavlidis
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Professor of Psychiatry, computational biologist focused on brain genomics. Find me at @paulpavlidis.bsky.social
British Columbia, Canada
Joined January 2010
RT @StevenSalzberg1: 98% of NIH grants that should have gone out this month, didn't. Despite court orders 'unfreezing' the funds, they are….
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RT @ubcmsl: Through the Gemma database, the lab of bioinformatician Dr. @paulpavlidis has harmonized thousands of transcriptomic data sets….
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I have an opening for a computational biology postdoctoral fellow in my lab! Details:
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RT @TheNeuro_MNI: Canada's largest mental health research institution, @CAMHnews, has become the fifth organisation to adopt #OpenScience p….
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RT @UBC_Psychiatry: CALL FOR APPLICATIONS! The UBC IMH & @UBC_Psychiatry invite qualified applicants to apply for the IMH Marshall Fellows….
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RT @AVogelCiernia: Check out my lab's new tool set: Development of a high-throughput pipeline to characterize microglia morphological state….
biorxiv.org
As rapid responders to their environments, microglia engage in functions that are mirrored by their cellular morphology. Microglia are classically thought to exhibit a ramified morphology under...
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RT @ubcmsl: Deadline for Asst. Prof in Computational Cell Biology is November 23rd. Still lots of time. Apply here
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RT @ubcmsl: 📣We're hiring! The MSL is seeking a Canada Research Chair Tier 2 in Computational Cell Biology to join our research community.….
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RT @TheNeuro_MNI: 📢 Attention Researchers! 📢 The Neuro – Irv and Helga Cooper Foundation Open Science Prizes are a fantastic opportunity to….
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RT @StevenSalzberg1: Major, fatal errors found in the data and methods of a 2020 paper in @Nature, including millions of reads mis-identifi….
biorxiv.org
We re-analyzed the data from a recent large-scale study that reported strong correlations between microbial organisms and 33 different cancer types, and that created machine learning predictors with...
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Latest work from my lab just out, on integrating hundreds of genomics datasets to identify candidate targets of transcriptional regulators - proud of great work led by Alex Morin!
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RT @INCForg: 📢Call to present at INCF Neuroinformatics Assembly 2023!📢. Want to speak in our investigator-led talks on FAIR neuroscience? W….
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RT @LSIbioinfo: We are hiring!. Looking for a bioinformatician to lead workshops, do some analysis and guide trainees. Note that all staff….
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RT @TroyMcDiarmid: Exceptionally stoked to share our new work entitled “Multiplex, single-cell CRISPRa screening for cell type specific reg….
biorxiv.org
CRISPR-based gene activation (CRISPRa) is a promising therapeutic approach for gene therapy, upregulating gene expression by targeting promoters or enhancers in a tissue/cell-type specific manner....
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RT @DylanWRE: Welcome to the Open Sciece Institute community DMCBH!. Looking forward to working with you to create the open future of brain….
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RT @DMCBrainHealth: The DMCBH is pleased to officially become an #OpenScience Institute! Through a partnership with @TheNeuro_MNI's Tanenba….
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RT @DMCBrainHealth: Watch this cool video from @tomscott to learn more about the "rabbit line" that runs from @TRIUMFLab to the DMCBH. This….
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We're still seeking candidates for a bioinformatics programmer/analyst in my group, to contribute to large-scale analyses of genomics data with a neuroscience focus - job description has been updated, please share!
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RT @shamsChronicles: My dissertation's Chapter 4 is now available. Titled “Cataloging the potential functional diversity of Cacna1e splice….
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RT @NeuroLibre: The CONP believes many of the challenges faced by both fundamental and clinical neuroscientists can be tackled with #opensc….
osf.io
Large-scale data-centric challenges faced by neuroscientists, such as improving reproducibility and data reuse, could be overcome by adopting open science practises. The Canadian Open Neuroscience...
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