Explore tweets tagged as #webknossos
@webknossos
WEBKNOSSOS
6 days
🌟Enhancement🌟. If you copy the position to your clipboard (e.g. from Webknossos, an email from a colleague or your notes), you can now paste the position anywhere in the Webknossos UI. No need to activate the position control.
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@webknossos
WEBKNOSSOS
2 months
Working with large datasets? Watch our workflow video to learn how to upload, organize with folders and metadata, set access permissions, and more - making data management seamless.
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@webknossos
WEBKNOSSOS
1 day
Tuesday tips 🐾 for Beginners. Did you know that you can toggle crosshairs and scalebars on or off in WEBKNOSSOS? Simply go to the settings in the left sidebar and customize your view. Check out the Youtube Playlist for more tips:
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@webknossos
WEBKNOSSOS
13 days
🌟Enhancement🌟. Make the 3D meshes of your segments translucent. Great for revealing inner segments, such as as cell organelles. Also, translucent meshes look really cool 😎
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@webknossos
WEBKNOSSOS
2 months
🌟Enhancement🌟. Navigate WEBKNOSSOS faster with the new Command Palette. It allows you to streamline your workflow by quickly searching for tools, jumping to specific datasets, and accessing key features with just a few keystrokes. Activate with 'Ctrl/Cmd + P'
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@webknossos
WEBKNOSSOS
1 month
Tuesday tips 🐾 for Pros. Did you know you can easily decide whether you want to overwrite while annotating? For example, when using the eraser, just press “Shift” to remove only the active segment. This shortcut also works for the brush and lasso! . Check out the Youtube
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@kdmicheva
Kristina Micheva
2 years
Color-coordinated EM. Chapter 2. Autumn synapses with #webknossos
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@webknossos
WEBKNOSSOS
1 month
🌟Enhancement🌟. Only show selected segments. Toggle the “Hide unlisted segments” setting to pick which segments will be shown.
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@webknossos
WEBKNOSSOS
8 days
Tuesday tips 🐾 for Beginners. Did you know you can create bounding boxes? They help define regions of interest, export specific data, and more!. Check out the Youtube Playlist for more tips:
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@kdmicheva
Kristina Micheva
2 years
Color-coordinated EM. Chapter 1. Synapses and magnolias with #webknossos
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@webknossos
WEBKNOSSOS
15 days
Tuesday tips 🐾 for Beginners. Did you know you can customize skeleton colors? Let WEBKNOSSOS choose a color for your tree or select your preferred shade by right-clicking and choosing 'Change Tree Color'. Check out the Youtube Playlist for more tips:
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@Ceitec_CellimCF
Cellular Imaging Core Facility - CEITEC
8 months
Day1: FAIR, RDM, OneDATA, LoG, Gaussian, Webknossos, Fiji, CellProfiler. Busy day.
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@webknossos
WEBKNOSSOS
2 months
Tuesday tips 🐾 for Pros. While using the brush, press and hold ‘Shift’ to temporarily activate the segment picker - or ‘Shift + Ctrl’ to switch to the eraser. Check out the Youtube playlist for more tips:
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@helenelab2020
Helene Schmidt
4 months
Super happy that our papers #2 and #3 from our 3-person lab just went online on bioRxiv! First large-scale 3DEM dataset from mouse hippocampus CA1 check out the beautiful data on webknossos .
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@LorenzoCangian1
Lorenzo Cangiano 🇮🇹🇪🇺
17 days
@webknossos I know you're currently geared towards EM data and volume segmentation, but there seems to be a paucity of tools for tracing and complex annotation of TB-sized LSFM datasets (multichannel and semi-automatic tracing). Would be great if you expanded a bit in this direction. .
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@jostriebel
Jonathan Striebel
2 years
@notjustmoore @zarr_dev @NFDI_de @nfdi4bioimage Props to @albane_dlv (@webknossos @scalableminds) for the awesome poster design! Happy to see it's well and alive 🚀
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@webknossos
WEBKNOSSOS
4 months
🌟Enhancement🌟. You can now edit segment or skeleton tree names by double-clicking their entry in the list - or change their names directly the metadata tab. Plus, you can now double-click on a segment in the segmentation to activate it!
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@MaKaefer
Marie Held 👩‍💻🔬💻🖼🔢
2 years
@jobragantini @martweig @normanrz @webknossos @luxendo @bruker @zeiss_micro @zeiss_arivis @ilastik_team @napari_imaging @guiwitz @DanielKrentzel @digitalsreeni Segmentation approaches. Work from the top down. if data allows easy and quick threshold segmentation, there is no need to overcomplicate the process but if it doesn’t work, take the next step. #CBIAS2023
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@normanrz
Norman Rzepka 🇺🇦
2 years
Helping bioimage analysts in new ways! #CBIAS2023 @webknossos
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