Segata Lab
@cibiocm
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The Laboratory of Computational Metagenomics led by @nsegata **We are hiring, get in touch if interested!** Moderator @svetlana_up
Trento (Italy)
Joined April 2016
The new version of MetaPhlAn (v4.2.2) released! 📌taxonomic profiling of long-read metagenomes for the first time 📌new version of the MetaPhlAn db (vJan25_202503) containing >21k new SGBs Try it out & @hutlab and we are looking forward to your feedback! https://t.co/Y1JXrKS4SG
forum.biobakery.org
Announcement We are pleased to share that MetaPhlAn 4.2.2 is now available, which incorporates taxonomic profiling of long-read metagenomes for the first time and includes a new version of the...
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Do not miss the Illumina #MVIF webinar: @nsegata @SerenaManara, and Amadou D. Gueye will discuss the latest NGS advances in microbiome research! Registration free!
SAVE THE DATE: 27 October, 2025 and join speakers from both @illumina and #MVIF! Registration for the webinar is free: https://t.co/zSlNdwmBvs
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💫 #MVIF Season 5 💫 Check out the program and feel free to join the keynotes by presenting your work–abstract submission is open: https://t.co/GDOL5fron2
#MVIF is proudly supported by @illumina @CorundumSB and our non-commercial co-organizing partners @SeeraveF @CUNYSPH
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Join #MVIF 42 https://t.co/yZrmh8c1cO and #MeetTheSpeakers 🇺🇸Peter Turnbaugh (@PTurnbaugh) will talk about a microbiome-informed approach to pharmacology!
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Fantastic presentation by @nsegata @cibiocm @gpiccinn lab! Understanding cancer risk factors - the journey and hurdles for EOCRC ! @CancerGrand stool Microbiome / PFAS .. / diet / sleep - lot of discussions ..
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Congrats to ALL #EESMicrobiome poster prize winners! Our lab member ✨ Gabriel Baldanzi (@gbaldanzi)✨ won the prize with his poster on gut microbiome signature of type 2 diabetes in 3,692 cases and >200,000 controls.
Wrapping up #EESMicrobiome 🦠✨ 🎤 Last talk on 'Deciphering the human microbiome with chemistry' by Emily Balskus (Harvard University) 💡 Most participants said they’d definitely like to attend again — a clear sign of the value this meeting brings to the community. 🎉
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Thrilled to have received the Poster Prize at #EESMicrobiome @EMBLEvents for our study on gut microbiome signatures of type 2 diabetes in >200,000 👥👥. Very grateful to my colleagues and especially my mentor @nsegata for giving me the opportunity to carried this work. @cibiocm
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☀️ It’s a sunny day at 'The human microbiome' symposium and the vibes are just right 😎 #EESMicrobiome Nothing beats enjoying lunch outdoors, soaking up the late summer sun, and catching up with colleagues between sessions 🌿🍴
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🦠☀️ Good morning from Day 3 of 'The human microbiome' symposium! #EESMicrobiome ☕🥨 Fuelled by coffee and pretzels, we’re starting strong with Session 4: Microbiome–host interactions in health and disease. 🔹Chaired by Emily Balskus (Harvard University) & Peer Bork (EMBL
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TODAY at #EESMicrobiome
On Thursday, 18 Sept. during Flash talk (ft) session 2 (16:30 -17:10) and Poster (p) session 2 (17:10 – 19:10) ✨ @gbaldanzi ✨ @gpiccinn ✨ @cengoni451 will present our latest findings! Looking forward to sharing #microbiome science! 3/3
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Our scientific organisers opened ‘The human microbiome’ symposium by giving us a brief update on their most recent work 🦠 #EESMicrobiome 🔹Mani Arumugam, University of Copenhagen, Denmark 🔹Ami Bhatt, Stanford University School of Medicine, USA 🔹Peer Bork, EMBL Heidelberg,
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🦠🌍 Welcome to Day 2 of 'The human microbiome' EMBO | EMBL Symposium! #EESMicrobiome We’re kicking things off with Session 2: Functional insights into microbial communities 🧬 🔹 First talk: “Small proteins of the human microbiome and beyond” by Luis Pedro Coelho – Queensland
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TODAY at #EESMicrobiome
On Wednesday, 17 Sept. from 16h do not miss the Flash talk (ft) session 1 and Poster (p) session 1 and meet our lab members: ✨@Fackelmeister ✨@v_heidrich 2/3
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What an amazing start to #EESMicrobiome! So many wonderful talks already on day 1 - huge congrats to Liviana Ricci @cibiocm for her fantastic talk on strain #transmission between babies in nurseries! 🥳 @v_heidrich @gbaldanzi @gpiccinn @cengoni451
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🦠🧑🏼⚕️ We are kicking off the #EESMicrobiome symposium by taking a couple of hours this afternoon to discuss the gut microbiome in the context of COVID. The Global Grants for Gut Health Symposium: The gut microbiome and long COVID is now underway at the auditorium! ➡️ Introductory
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NEXT WEEK -> #mbkceesme2025 🇬🇷 Drop me a line if you want to chat over ☕ about open science and open source: #BugSigDB #curatedMetagenomicData @MicrobiomeVIF @outreachy @NSURPorg #microbiomedigest 👋 @mikrobiokosmos
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See you at #EESMicrobiome in Heidelberg🇩🇪
NEXT WEEK we are at #EESMicrobiome in Heidelberg🇩🇪 Full program: https://t.co/3clvl5GgEe On Tuesday, 16 Sept. see you at Session 1 from 15:30 ✨Liviana Ricci will give a talk "Microbial strain transmission between infants in nurseries drives gut microbiome development" 1/3
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Looking forward to this year's #EESMicrobiome and happy to be presenting two posters: n.97 on #plastics and the human #microbiome and n.98 on our work recently published in Nat Micro on the #vegan, vegetarian and omnivore gut microbiome!
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On Thursday, 18 Sept. during Flash talk (ft) session 2 (16:30 -17:10) and Poster (p) session 2 (17:10 – 19:10) ✨ @gbaldanzi ✨ @gpiccinn ✨ @cengoni451 will present our latest findings! Looking forward to sharing #microbiome science! 3/3
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On Wednesday, 17 Sept. from 16h do not miss the Flash talk (ft) session 1 and Poster (p) session 1 and meet our lab members: ✨@Fackelmeister ✨@v_heidrich 2/3
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