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Segata Lab Profile
Segata Lab

@cibiocm

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The Laboratory of Computational Metagenomics led by @nsegata **We are hiring, get in touch if interested!** Moderator @svetlana_up

Trento (Italy)
Joined April 2016
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@cibiocm
Segata Lab
6 months
The new version of MetaPhlAn (v4.2.2) released! 📌taxonomic profiling of long-read metagenomes for the first time 📌new version of the MetaPhlAn db (vJan25_202503) containing >21k new SGBs Try it out & @hutlab and we are looking forward to your feedback! https://t.co/Y1JXrKS4SG
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forum.biobakery.org
Announcement We are pleased to share that MetaPhlAn 4.2.2 is now available, which incorporates taxonomic profiling of long-read metagenomes for the first time and includes a new version of the...
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@cibiocm
Segata Lab
19 days
📌Day 3 (Nov 27) @Fackelmeister will talk about her work (@NatureMicrobiol) on the vegan, vegetarian & omnivore gut microbiome 📌Day 4 (Nov 28) @cengoni451 will share how @hritd09 & other lab members have been building the curatedFoodMetagenomicData: https://t.co/fpXuONA7Un 2/2
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github.com
Public repository for cFMD - curatedFoodMetagenomicData - SegataLab/cFMD
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@cibiocm
Segata Lab
14 days
cFMD v1.3.0 is here! 🚀 We're thrilled to announce the release of the latest version of the curatedFoodMetagenomicData (cFMD) https://t.co/fpXuONA7Un While we're keeping the same core datasets & samples, we've packed this release w/ significant improvements under the hood. 1/4
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github.com
Public repository for cFMD - curatedFoodMetagenomicData - SegataLab/cFMD
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@cibiocm
Segata Lab
14 days
Next week at #microbiome (a symposium exploring the critical role of the microbiome in health, disease, and therapeutic innovation) in Frankfurt 🇩🇪 @nsegata will talk about the microbiome in nutrition and cardiometabolic health. Full program here:
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gsh.idloom.events
Join us for a symposium exploring the critical role of the microbiome in health, disease, and therapeutic innovation. Leading experts will present cutting-...
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@cibiocm
Segata Lab
14 days
Next week @nsegata will give a keynote talk at the 8th International Conference on Microbiome Engineering in Antwerp 🇧🇪 Full program here:
aiche.org
International Conference on Microbiome Engineering
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@cibiocm
Segata Lab
14 days
BIG thanks to all our partners in #DOMINOEU and #MASTER_EU for making this possible! 🙌 Special recognition to: @SciFoodHealth @EUFIC @MASTER_IA_H2020 We are happy to hear your feedback! https://t.co/fpXuONA7Un 4/4
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github.com
Public repository for cFMD - curatedFoodMetagenomicData - SegataLab/cFMD
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@cibiocm
Segata Lab
14 days
2️⃣ Improved MetaPhlAn 4 taxonomic profiles of the 3,310 food metagenomes in cFMD, using the latest MetaPhlAn 4 marker genes database (vJan25). This update is the result of collaborative efforts across our research community. 3/4
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@cibiocm
Segata Lab
14 days
Here's what's new: 1️⃣ Incorporation of the MAGs added in the previous version (v1.2.1) into MetaRefSGB vJan25, allowing definition of novel food SGBs and increased food SGB representation among cFMD MAGs (+117 prokaryotic SGBs; +2 eukaryotic SGBs) 2/4
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@cibiocm
Segata Lab
14 days
cFMD v1.3.0 is here! 🚀 We're thrilled to announce the release of the latest version of the curatedFoodMetagenomicData (cFMD) https://t.co/fpXuONA7Un While we're keeping the same core datasets & samples, we've packed this release w/ significant improvements under the hood. 1/4
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github.com
Public repository for cFMD - curatedFoodMetagenomicData - SegataLab/cFMD
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@cibiocm
Segata Lab
19 days
Next week, meet our lab members at the Food System Microbiomes Conference @FoodSysMicrobio in Wageningen 🇳🇱 📌Day 1 (Nov 25) @nsegata will give an opening lecture: Human and food microbiomes within a One Health perspective More details: https://t.co/3PUFwruZMc 1/2
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@cibiocm
Segata Lab
19 days
📌Day 3 (Nov 27) @Fackelmeister will talk about her work (@NatureMicrobiol) on the vegan, vegetarian & omnivore gut microbiome 📌Day 4 (Nov 28) @cengoni451 will share how @hritd09 & other lab members have been building the curatedFoodMetagenomicData: https://t.co/fpXuONA7Un 2/2
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github.com
Public repository for cFMD - curatedFoodMetagenomicData - SegataLab/cFMD
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@cibiocm
Segata Lab
19 days
Next week, meet our lab members at the Food System Microbiomes Conference @FoodSysMicrobio in Wageningen 🇳🇱 📌Day 1 (Nov 25) @nsegata will give an opening lecture: Human and food microbiomes within a One Health perspective More details: https://t.co/3PUFwruZMc 1/2
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@cibiocm
Segata Lab
20 days
TODAY at the Precision Nutrition Symposium by @EURAC in Bolzano 🇮🇹 @gbaldanzi shared the insights from the PREDICT studies on diet, microbiome, and health & @nsegata gave a keynote talk on metagenomics and the diet-microbiome-health axis! (📸@msabrysarhan was in the audience)
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@cibiocm
Segata Lab
27 days
Right now, @nsegata, as a co-investigator of #PROSPECT, is giving a keynote talk: Metagenomics in oncology: capacity building and career development for translational initiatives See full programme here:
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cancergrandchallenges.org
Future Leaders' Conference 2025
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@cibiocm
Segata Lab
27 days
📸 Today at the Cancer Grand Challenges Future Leaders’ Conference 2025 @gpiccinn presenting our latest findings on microbiome in colorectal cancer! #FLC25 #CancerResearch cc @CancerGrand
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@cibiocm
Segata Lab
27 days
Congrats, Amir! #proudteam
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@CancerGrand
Cancer Grand Challenges
28 days
“Take the most exciting options, take risks and be bold” We heard powerful motivational words today from Karen Vousden, Principal Group Leader at @TheCrick and #CancerGrandChallenges Scientific Committee member, at day one of our Cancer Grand Challenges Future Leaders’
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@MicrobiomeVIF
Microbiome Virtual International Forum
28 days
Join us!
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@MicrobiomeVIF
Microbiome Virtual International Forum
28 days
Today, join #MVIF 43! We will discuss the new bioinformatics approaches, latest findings in drug development, cancer studies and more! There's still time to register:
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cassyni.com
Microbiome Virtual International Forum (MVIF) is a recurring bite-sized alternative to multi-day microbiome conferences: Regular short-format (~3 hours) conferences that provide all the key elements...
@MicrobiomeVIF
Microbiome Virtual International Forum
1 month
🆕 #MVIF 43 program is out! Free registration: https://t.co/UerdpXyk7T ⭐️ Highlights: 🇵🇰 Muhammad Faheem Raziq 🇺🇸 Fuqing Wu ⭐️ Keynote: 🇮🇳 Deepa Agashe ⭐️ Talks: 🇺🇸 Lukas Bethlehem 🇵🇱 Kinga Zielinska 🇸🇪 Eran Elhaik (@EranElhaik)
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@cibiocm
Segata Lab
28 days
If you are at The Rise of Early-Onset Cancers conference, this morning you can discuss our latest findings with @Shahzai33649948 and in the afternoon @nsegata will talk about the microbiome in early-onset colorectal cancer! See you in Bergamo!
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@cibiocm
Segata Lab
30 days
On Wednesday (Nov 12) at The Rise of Early-Onset Cancers conference in Bergamo 🇮🇹 @Shahzai33649948 will give a talk "Microbiome alterations of colorectal cancer according to age of onset, stage, and anatomic location" See a full program here: https://t.co/jZQi0VaTSE
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