bpeters
@bpeters
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Immunologist, Physicist, Hamburger
San Diego, California
Joined March 2008
We are excited to announce that the 3rd (Public) CMI-PB Challenge is officially underway! Test out your modeling skills to predict immune responses to B. pertussis #whoopingcough booster vaccination using multi-omics datasets for a chance to win. #bioinformatics #immunology (1/5)
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The 2025 IEDB Virtual User Workshop has kicked off! Our Day 1 presenters include @SetteLab, @bpeters , @Alba_Grifoni, Dr. Randi Vita, Kelly Wheeler and Lindy Edwards. We're delving into how to use the database with real research examples #iedbuw2025
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Join our free virtual short course on July 16 to learn how to use the CEDAR database and next-generation tools for cancer immunology research! Speakers include @SetteLab @bpeters
https://t.co/J77oF6SKaE
Register for Empowering Cancer Immunology Research with CEDAR: A Virtual Short Course! Join us for the free Zoom Webinar on July 16 from 9am to 12pm Pacific Time, covering the fundamentals of the CEDAR database, tools, and other research topics. https://t.co/mIqFa6hkUG
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Don’t forget! 🌺🧪 Our HIPC symposium is happening tomorrow — join us for a great lineup of talks from @bpeters @LungDrC @SetteLab @ZyulinaVictoria & Thomas Hagan Tues May 6th | 8:30-10:30 am | Room 313C #Immunology #AAI2025 #HIPC
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Day 2 is here! Visit booths #535 & #537 to chat with us about immune receptors, epitopes & study data integration efforts (and #mAcademia 🌰🍫 of course) @HIPCProject @iedb_ @CEDAR_epitopes #AAI2025 #IMMUNOLOGY2025
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Join us - learn more about #systems #immunology and our free #data at #AAI2025 in Hawaii 🌴 (May 6) #ImmuneTwitter #IDtwitter Hear from speakers @LungDrC
@SetteLab
@ZyulinaVictoria
https://t.co/FtF4bSSNP6
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Exciting news!! We are happy to announce that we will have a HIPC Symposium at @ImmunologyAAI on Tues, May 6th. HIPC will also have a Super Booth at #AAI2025 along with @iedb_ and the iAKC Project. Check out the full Symposia list, and see you there!🔗:
immunology2025.aai.org
Information and details about Guest Symposia to be presented at IMMUNOLOGY2025™!
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The IMMREP25 TCR specificity prediction challenge is now live on Kaggle! Get involved: https://t.co/7Jqbt8KhbX Huge thanks to: Matthew Noakes, Damon May, @EveRichardson20 @bpeters @AdaptiveBiotech @iedb_ @airr_community
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How to Get Involved: 🧬 Visit https://t.co/ts0D1clJW4 to register. 🗓️ Deadline to submit: Nov 22, 2024. 📈 Let’s solve this challenge and make a difference in global health! (5/5)📷
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Our CMI-PB challenge unites researchers, data scientists, and immunologists to collaborate to better understand pertussis biology and predict immune responses to pertussis vaccination, including antibody titers and cytokine profiles. (4/5)
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B. pertussis causes prolonged illness, especially in infants, the elderly, and immunocompromised individuals. Complications can be severe, leading to hospitalizations and, in some cases, fatalities. (3/5)
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Understanding immunity and improving vaccines are key to protecting vulnerable populations, which is our goal through our CMI-PB Challenge to predict immune responses and help fight B. pertussis https://t.co/ts0D1clJW4 (2/5)
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Whooping Cough Cases Are Surging in the U.S. Cases in 2024 are 5x higher than last year, underscoring the need for ongoing pertussis research and stronger prevention efforts. https://t.co/T9OUXqpxAv (1/5)
nytimes.com
The disease can cause fever, a runny nose and fierce coughing fits.
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A huge thank you to our collaborator labs at Yale, UCSD, and LJI: @skleinstein, @ferhatay, @JoaquinReyna8, @pramodsshinde, and @JeremyGygi, to name just a few. (5/5)
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Enter the challenge on your own, or work with a team of researchers! The submission deadline is November 22, 2024. For more information (accessing the data, how to submit, etc) please check out our website at https://t.co/hU4XVlKV7d🧪🧑🔬(4/5)
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Top performers will be rewarded with a cash prize - 1st place: $3,000, 2nd place: $1,500, 3rd place: $500. Also: bragging rights, and an opportunity for a co-authorship (3/5)
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Since 2020, we have built a resource of multi-omics datasets to study Pertussis vaccination. As a contestant, your goal is to create a prediction model with the available data in order to predict vaccine responses. Read about the previous contest: https://t.co/tpc1qgxGFA (2/5)
cell.com
Shinde et al. establish a community resource to compare patients' vaccine responses and to host annual contests to predict vaccination outcomes. They find specifically trained multi-omics models and...
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Read our (@bpeters) article in Patterns explaining why contrary to recent popular belief, the ROC-AUC does not inflate performance estimates in imbalanced data 👇
Online Now: The receiver operating characteristic curve accurately assesses imbalanced datasets https://t.co/jYtnn8Gpyg
#datascience
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