Anand Mayakonda πŸ•‰οΈ Profile
Anand Mayakonda πŸ•‰οΈ

@anand_mt

Followers
275
Following
1K
Media
49
Statuses
468

Bioinformatics, genetics, and cancer genomics @dkfz. I also tweet #Rstats #dataviz @baseRgraphics creator @grabstractio

Heidelberg
Joined April 2009
Don't wanna be here? Send us removal request.
@Faheem_uh
Faheem Ullah
7 days
How to convert research paper to slides in 1 minute? First, very quickly, why do we need to do this? ➝ We often need to convert papers to slides ➝ To present the paper in a conference ➝ To present our research to our supervisors ➝ To pitch our research for funding, and so
2
44
185
@anand_mt
Anand Mayakonda πŸ•‰οΈ
10 days
This is amazing! If you’re looking for something to edit and organize your manuscript figures and panels - here it is. Completely free. πŸ™Œ
@Affinity
Affinity
10 days
It's finally time to announce what we've been working on. Welcome to the all new Affinity. Download now from https://t.co/d9OTjPlFwn - welcome to the start of creative freedom for all, totally free. Forever.
0
0
1
@rn_toth
Reka Toth
19 days
Thrilled to announce our new paper, "Pipeline Olympics," is finally out in @NAR_OpenAccess! This was a massive effort, co-led with @pavlo_lutsik . We present a gold-standard benchmark for DNA methylation sequencing workflows. Check it out:
Tweet card summary image
academic.oup.com
Abstract. DNA methylation is a widely studied epigenetic mark and a powerful biomarker of cell type, age, environmental exposures, and disease. Whole-genom
1
2
6
@anand_mt
Anand Mayakonda πŸ•‰οΈ
20 days
πŸ‘πŸ‘πŸ‘
@AnthropicAI
Anthropic
20 days
We’re building tools to support research in the life sciences, from early discovery through to commercialization. With Claude for Life Sciences, we’ve added connectors to scientific tools, Skills, and new partnerships to make Claude more useful for scientific work.
0
0
2
@therealRYC
Robert Y. Chen
1 month
🚨 The older the sperm, the more likely it is to cause autism Sequencing sperm using nearly error-free sequencing β†’ measure % sperm carrying disease-causing mutations: 2% at age 30 β†’ 4.5% at 70 Most were autism genes New paper in @Nature today 🧡
138
625
2K
@grabstractio
grabstract
1 month
#grabstract of the day Single Vaccine, Triple Protection. Scientists create a trivalent vaccine for three deadly brain viruses. @MarkSlifka https://t.co/5qqWaPTcTb
0
1
1
@grabstractio
grabstract
1 month
#grabstract of the day South American lung fish - Largest genome sequenced so far (30X larger than the human genome). https://t.co/7sb29JbfJD
0
1
1
@anand_mt
Anand Mayakonda πŸ•‰οΈ
2 months
#maftools crossed over 4000 citations. Thank you all the users and constant feedback πŸ™ @genomeresearch @dechen_lin @Bioconductor
2
2
16
@anand_mt
Anand Mayakonda πŸ•‰οΈ
6 months
Introducing Grabstract. An AI tool that transforms your research texts into visuals. Please retweet and share πŸ™
@grabstractio
grabstract
6 months
Introducing grabstract: Transform complex scientific texts into clear, visual insights Just paste your abstract to create: πŸ“Š Graphical abstracts πŸ–ΌοΈ Scientific posters 🌐 Mermaid diagrams πŸ“ˆ Infographics Try it for free: https://t.co/4h9jMEbN2T #AcademicTwitter #SciComm
1
3
7
@grabstractio
grabstract
6 months
Introducing grabstract: Transform complex scientific texts into clear, visual insights Just paste your abstract to create: πŸ“Š Graphical abstracts πŸ–ΌοΈ Scientific posters 🌐 Mermaid diagrams πŸ“ˆ Infographics Try it for free: https://t.co/4h9jMEbN2T #AcademicTwitter #SciComm
1
1
2
@EtienneSollier
Etienne Sollier
2 years
Introducing figeno, my visualization software for (epi)genomics🧬🎨. Supports many data types (bigwig, HiC, @nanopore data with base modifications, WGS...) and is easy to use with a GUI. Can visualize multiple regions (e.g. for breakpoints). https://t.co/S34McFH1ez
8
82
320
@dechen_lin
De-Chen Lin
2 years
Big thanks to all the Reviewers and NIDCR! We are looking for passionate researchers to work with us on HNSCC!
9
2
29
@anand_mt
Anand Mayakonda πŸ•‰οΈ
2 years
Trackplot: a fast and minimal dependency R script for epigenomic enrichment plots https://t.co/rMtdqum7pl https://t.co/GusXJOfXt8
2
16
59
@anand_mt
Anand Mayakonda πŸ•‰οΈ
2 years
squaRify - A minimal, zero dependency package for drawing treemaps in R. Inspired by @laserson's squarify python implementation https://t.co/YjQEM02Nkx #treemaps #rstats
0
2
7
@NatureGenet
Nature Genetics
3 years
πŸš€ ONLINE @NatureGenet πŸ“° Neuroblastoma arises in early fetal development and its evolutionary duration predicts outcome πŸ§‘πŸ½β€πŸ€β€πŸ§‘πŸ» Verena KΓΆrber, Frank Westermann, Thomas HΓΆfer, and team ⬇️ https://t.co/sd3hBjfQHN #neuroblastoma @NatResCancer
nature.com
Nature Genetics - Somatic evolutionary analysis of neuroblastoma, a pediatric tumor, proposes a common fetal time of origin. Notably, high-risk tumors exhibit early genomic instability and...
0
25
49
@GunjanShukla_93
Gunjan Shukla
3 years
Extremely cool.
0
2
5
@brent_p
brent pedersen
3 years
I've been meaning to advertise echtvar a bit more. Indeed it's oddly fast and pretty flexible for annotating with large databases. In the paper, we even encoded gene, transcript, impact for all possible SNPs (3 per position) and the archive is still small.
@anand_mt
Anand Mayakonda πŸ•‰οΈ
3 years
It’s unbelievable how fast #echtvar by @brent_p is. Annotating a whole genome vcf (5m vars) with gnomad and internal allele frequencies takes < 5mins. πŸ™Œ
0
8
25
@anand_mt
Anand Mayakonda πŸ•‰οΈ
3 years
It’s unbelievable how fast #echtvar by @brent_p is. Annotating a whole genome vcf (5m vars) with gnomad and internal allele frequencies takes < 5mins. πŸ™Œ
github.com
using all the bits for echt rapid variant annotation and filtering - brentp/echtvar
1
10
74
@SThongjuea
Supat Thongjuea (ΰΈͺΰΈΈΰΈžΰΈ±ΰΈ’ΰΈ™ΰΉŒ ΰΈ—ΰΈ­ΰΈ‡ΰΉ€ΰΈˆΰΈ·ΰΈ­)
3 years
We are seeking computational postdocs for single-cell genomics in cancer @DKFZ and @KiTZ_HD Please help RT Thank you https://t.co/YLWphFg2pG
0
13
10