Alex MacKerell Profile
Alex MacKerell

@alex_mackerell

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Grollman-Glick Professor of Pharmaceutical Sciences Director, CADD Center School of Pharmacy University of Maryland, Baltimore Co-founder and CSO, SilcsBio LLC

Baltimore, MD, USA
Joined February 2018
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@alex_mackerell
Alex MacKerell
4 days
RT @silcsbio: Run CGenFF for Just $1 per Molecule (July Only). Industry users can now generate topology and parameters for small molecules….
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@alex_mackerell
Alex MacKerell
4 days
Yes, it's been a great resource.
@olexandr
Olexandr Isayev 🇺🇦🇺🇸
5 days
Sad end of #compchem era… After 30+ years of service, CCL - computational chemistry list will be closing… 😢
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@alex_mackerell
Alex MacKerell
15 days
Beyond on overview of physics and ML-based methods applied to antibody-drug conjugates (ADCs) the paper presents calculations showing how MD simulations and the SILCS technology may be used to facilitate ADC development using utilities available from @silcsbio.
@nchembio
Nature Chemical Biology
17 days
A new Perspective by Anastasia Croitoru, Asuka Orr, and @alex_mackerell discusses how computational methods can be used to facilitate the early-stage development and optimization of antibody-drug conjugates.
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@alex_mackerell
Alex MacKerell
20 days
Congrats Ryan!.
@umsop
University of Maryland School of Pharmacy
21 days
🚨 UMSOP’s Ryan Pearson, PhD, has been awarded a $3.4M NIH grant to develop a first-in-class, drug-free nanoparticle immunotherapy for sepsis. This innovative approach could transform treatment strategies. 🔗 .#umarylandpharmacy #Nanomedicine
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@alex_mackerell
Alex MacKerell
1 month
RT @zoecournia: Please RT! .I have 2 postdoctoral positions in my lab @BRFAA_IIBEAA to work on MD sims for protein allostery, cryptic pocke….
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@alex_mackerell
Alex MacKerell
3 months
Nice to get a JCIM cover! Check out the SILCS-based method for dissociation pathway identification, 10.1021/acs.jcim.4c01814, and the SILCS-Kinetics physics/ML method for rapid estimation (really fast. ) of small molecule koff values was just accepted in JCTC. @silcsbio.
@JCIM_JCTC
JCIM & JCTC Journals
3 months
📢 Check the new Volume 65 Issue 6 of #JCIM
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@alex_mackerell
Alex MacKerell
3 months
RT @mddbEU: 📢 Our article calling for a #FAIR database for #MolecularDynamics simulation data has now been peer-reviewed and published in @….
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@alex_mackerell
Alex MacKerell
4 months
For all the CGenFF fans out there, we've undertaken a significant expansion of the training set and extended the coverage to 4-membered rings.
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@alex_mackerell
Alex MacKerell
5 months
RT @cojocarulab: The postdoc position in our group is now officially open. Feel welcome to still write to me about it but to be considered….
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@alex_mackerell
Alex MacKerell
5 months
RT @CharmmGui: EnzyDocker:.
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@alex_mackerell
Alex MacKerell
5 months
RT @silcsbio: Reminder to register! SILCS v2025 will be available starting next week. Join us to take an in-depth look.
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@alex_mackerell
Alex MacKerell
6 months
RT @silcsbio: 🌟 Join Us for the SILCS v2025 Release Webinar! 🌟. Key Highlights being coverd:.- Precise docking w/ water inclusion.- Improve….
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@alex_mackerell
Alex MacKerell
6 months
Congratulations Roland! Onward.
@FoxChaseCancer
Fox Chase Cancer Center
6 months
We're proud to share that @RolandDunbrack, PhD, professor in the Cancer Signaling and Microenvironment Research Program at Fox Chase Cancer Center, has been appointed co-leader of the program alongside its current leader, @ednacukierman, PhD. Read more:
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@alex_mackerell
Alex MacKerell
6 months
RT @silcsbio: 🎥 Missed the SILCS-WATER webinar? Watch the recording now!. Learn how SILCS-WATER provides exciting possibilities for underst….
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@alex_mackerell
Alex MacKerell
7 months
SILCS-Water allows for inclusion of explicit waters during ligand docking offering improved binding affinities and poses for select systems in a computationally efficient approach. @SilcsBio is hosting seminar on January 7, 2025. Please join us!.
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@alex_mackerell
Alex MacKerell
7 months
RT @JorgensenWL: @JocelynnPearl @Nature Agreed. In the meantime, if you email authors, they almost always accommodate with a pdf. Problem….
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@alex_mackerell
Alex MacKerell
7 months
We've recently published a few papers on the polarizable Drude FF including a new water model.
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@alex_mackerell
Alex MacKerell
7 months
RT @JPhysChem: Exciting new work! The Drude FF with NBFIX & NBTHOLE for Group 1 ions was refined, achieving accurate ion-biomolecule intera….
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@alex_mackerell
Alex MacKerell
7 months
Congrats Bekah. I really enjoyed your seminar.
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@alex_mackerell
Alex MacKerell
7 months
RT @4HumanUnity: @VivekGRamaswamy Dear Vivek,. Let me get this straight: you’re out here hollering that 70% of federal research grants are….
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