Anaïs Bardet
@a_bardet
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Group leader @IGBMC - Permanent researcher @CNRS - Computational regulatory genomics @abardet.bsky.social
IGBMC, France
Joined May 2012
Analyzing whole genome DNA methylation data? Our new method MethyLasso is out in NAR! It can help you identify regions with low or partial methylation (LMR, UMR, DMV, PMD, PMD) or differentially methylated regions (DMR) and was benchmarked against others https://t.co/83dtbhDStP
academic.oup.com
Abstract. DNA methylation is an epigenetic mark involved in the regulation of gene expression, and patterns of DNA methylation anticorrelate with chromatin
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#ResultatScientifique🔎 | MethyLasso : un nouvel outil pour analyser les données de méthylation de l’ADN 🤝 @CNRS @CNRS_Alsace @IGBMC @INSERM ✍️ Anais Bardet 📕 @NAR_Open | https://t.co/FVosmIModH
https://t.co/99rb7jkHlF
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Happy to have contributed to this beautiful work from @evgenykvon lab!
How do enhancers work over distances that sometimes exceed megabases? Excited to share our work led by @gracecbower where we uncover a unique sequence signature globally associated with long-range enhancer-promoter interactions in developing limb buds: https://t.co/n0p7BdxSdq 1/
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Summer School on Chromatin Biology is back in August at @HelmholtzMunich. Start your journey into state-of-the-art chromatin biology with #epigenetics experts @robert_ife @metorrespadilla and Aloys Schepers – apply by April 5 for the 2024 student cohort. https://t.co/51SdTtN6i5
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Looking for a postdoc to join my team @institutpasteur @CNRS @InstitutPrairie. The candidate will develop machine learning methods for single-cell omics data. Project funded by the #ERCStG MULTI-viewCELL
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Next week !
#SaveTheDate 🗓️23rd February 📍Institut Jacques Monod Invited by the Gazave Lab (@stemdevevo), Anaïs Bardet (@a_bardet) will present the IJM seminar "Transcription factor sensitivity to DNA methylation" ➡️ https://t.co/OhNA7s2Je7
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Today, we - @stark_lab and @Eileen_Furlong lab (@EMBLheidelberg) - report the design of 40 synthetic enhancers for 5 tissue types in fruit fly embryos, in vivo. With only a few hundred enhancers per tissue for training, we adopt a stepping-stone transfer-learning approach: (5/N)
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🧬Opening for a postdoc in my group @NCMMnews @UniOslo @UniOslo_MED @unioslo_mn to generate deep learning models to enhance JASPAR @jaspar_db & UniBind, boosting gene regulation research. Project in collaboration with @anshulkundaje, @WyWyWa. Plz share https://t.co/vXHWK4aDVd
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New faculty position in Gene Regulation just posted at at Penn State! Come join the fantastic collaborative environment in the Center for Eukaryotic Gene Regulation ( https://t.co/JR0fxBNtmJ )! Review of applications starts Nov. 1st https://t.co/mHRfLWbNrg
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Check out MethyLasso, our new method to identify DMRs, LMRs, UMRs and DMVs from WGBS data https://t.co/LuBh2pqvHU
biorxiv.org
DNA methylation is an epigenetic mark involved in the regulation of gene expression and patterns of DNA methylation anticorrelates with chromatin accessibility and transcription factor binding. DNA...
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Super thrilled for @ISMBinfo @ISCB_RegSys RegSys track starting today! 🔬💻 🎉 Two days of fantastic science await with an incredible lineup of speakers. 🌟 Join us in room Rhone 2 for a deep dive into regulatory systems genomics. #ISMBECCB2023 #RegSys
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📢 Join us at ISMB/ECCB 2023 in Lyon from July 23-27! I wanted to share my excitement and encourage all of you in the scientific and computational biology community to join! See you there! https://t.co/1dVNBLc0lj
#ISMBECCB2023 #ComputationalBiology #Conference #Lyon #Virtual
invt.io
Register now
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We are looking for a bioimage analyst to join our team at the IGBMC Imaging Centre. More details here https://t.co/zEfQechGDw or DM me. @NEUBIAS_ @RTMFM1 @GDR_ImaBio @IGBMC @RISE_micro @Fr_BioImaging #bioimageanalysis
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For those interested in #germline_genes and #DNA_methylation, our paper with a systems view of germline genes regulation is out. @a_bardet
@umr7242
https://t.co/h4p3FU3oKg
academic.oup.com
Abstract. In mammals, many germline genes are epigenetically repressed to prevent their illegitimate expression in somatic cells. To advance our understand
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Registration and early abstract submission now open for the next ISMB/ECCB meeting https://t.co/1ebW4SIfXa. Join us July 23rd to 27th in sunny Lyon to hear about all the most exciting computational biology https://t.co/dAVkY1pfEI
@ISMBinfo
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📢 The call for applications for the position of #Director of the IGBMC is launched! The Institute is looking for a person to continue to promote the excellence of its #research on the international scene. All the info: https://t.co/bcimW4F6m0
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Happy to share that I have been awarded an ANR JCJC grant (young researcher) to study TF binding in the context of chromatin !
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Hey, there are PhD positions on Computational Biophysics available in my lab! Interested? #PhDpositions #ComputationalBiology #ComputationalBiophysics
https://t.co/VlMj7rO7Rk
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