nabbo (bio/acc)
@TensorTwerker
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bioengineering | comp bio @OpenBioAI @IGIBSocial's HPC queue gremlin
RNA-Seq
Joined April 2025
this is such a nice way to introduce bioinformatics, finished it in one go
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The same day I met a Harvard professor and performed a song with my ukulele (two separate events). Crazy.
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Had a great time listening to Dr. Spyros Artavanis-Tsakonas, faculty, Harvard Medical School’s Cell Biology department. He's super funny too
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I like POVME but can someone please upgrade it to Python3?
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I asked @OpenBioAI to analyze the @proteinbase dataset. Proteinbase is an open dataset of experimentally validated protein designs, created by @adaptyvbio. Here's a short summary of it: - BoltzGen although released just over a month ago, dominates - We're excellent at making
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The reason I like writing blogs is because that's how I teach myself. When I write, I ask myself more questions and I try to find answers. And when I find answers, I get more confused and ask myself more questions. This constant feedback loop is what helps you grow.
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The tumor microenvironment (TME) is the neighborhood around cancer cells which contains immune cells, support cells, blood vessels, oxygen and nutrients gradients. It controls how tumors grow and resists drugs. Studying this properly needs spatial imaging (seeing where cells
Today in Cell, we published new research showing how AI can help accelerate cancer discovery. With GigaTIME, we can now simulate spatial proteomics from routine pathology slides, enabling population-scale analysis of tumor microenvironments across dozens of cancer types and
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Feature Update: Seamless Project Continuity in OpenBio OpenBio now remembers exactly where you left off. Jump back into any project and instantly see your last chat, files, visualizations, and messages. Everything restores automatically.
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Interactive visualizations are very helpful for understanding protein structures, molecular data, and research insights. You can easily create these visualisations with @OpenBioAI. No coding required.
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Earlier we used to represent DNA with metal rods and clamps, not anymore.
The original DNA demonstration model, designed by James Watson and Francis Crick, ca. 1953. well I'm reading biology more these days all thanks to @TensorTwerker
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