
Manu Setty
@SettyM
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Assistant Professor, @fredhutch @HutchBasicSci & Translational Data Science IRC. Computational biologist | Single-cell data analysis and modeling.
Seattle, WA
Joined January 2011
Very excited to have Mellon out in @naturemethods today!.
Mellon accurately estimates cell-state densities using high-dimensional single-cell data, unveiling regulatory dynamics and mechanisms in cell differentiation. @SettyM @fredhutch
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My journey from south India to biomedical researcher in the United States is not too dissimilar to the one taken by @KamalaHarris mother. With deep gratitude for all the opportunities I have been provided, my vote is for respect, dignity and a new way forward.
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16 years after arriving in the United States, I am honored and proud to cast my first vote in a Presidential election to a daugher of immigrants, @VP @KamalaHarris !
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Are you an early career scientist who wants to pursue a research project in the lab of a Fred Hutch Computational Biologist mentor? If yes, then the #MahanFellowship is for you. Apply by Dec. 20, 2024! Learn more:
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RT @elhamazizi: Awesome week at Bertinoro #CompBio meeting! Exciting times for cancer evolution x tumor microenvironment! Thank you @Sohrab….
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Join us in this exciting symposium to learn about post-doc opportunities at @HutchBasicSci.
Calling everyone interested in #postdoc opportunities @HutchBasicSci! . Join us at the Pathfinders: Postdoc Recruitment Symposium @FredHutch. Explore our research programs, present your work, and network with current postdocs and faculty. Apply by July 8:
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@naturemethods Re-upping the tweetorial from our bioRxiv post here:
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Terrific work by @danielcjones in @EvNewell1 lab- Proseg is our go-to cell segmentation for all spatial transcriptomics data!.
Using in situ spatial transcriptomics? Try Proseg, @danielcjones’s new cell segmentation method based on probabilistic and Cellular Potts modeling. Great for @vizgen_inc Merscope, @10xGenomics Xenium, and @nanostringtech CosMx data. Preprint & code: (1/n).
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The #MahanFellowship supports young scientists in the early stages of their careers. We offer fellows a 21-month stipend as they pursue their proposed research project, alongside a mentor in one of our Herbold Computational Biologist labs. Apply today:
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RT @PhilippWeiler7: Say hello to CellRank 2, a unified framework for data view independent fate mapping! Have a look at our preprint on bio….
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Deadline this Friday!.
Calling all PhD (or equivalent) students within 2 years of graduation or who have graduated in the last year: Join us for an opportunity to visit with faculty at @FredHutch and hear about career opportunities at this world-renowned institution:
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Mellon framework can be extended to infer a density function that is continuous in both cell-state and time. We use this to interpolate densities between measured time points in time-series datasets. Thanks to @MarioniLab for the repo to download data: !
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