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Jimin Tan Profile
Jimin Tan

@tan_jimin

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20

Postdoc at NYU Langone (ML/Genomics/Imaging)

New York, NY
Joined September 2013
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@tan_jimin
Jimin Tan
2 months
RT @broadinstitute: Meet Bo Xia, a systems biologist using both AI tools and experimental technologies to understand how the genome control….
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@tan_jimin
Jimin Tan
3 months
RT @NYUDataScience: Former CDS MS student @tan_jimin, CDS Professor @kchonyc, & others have developed an AI model that identifies tumor mic….
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@tan_jimin
Jimin Tan
4 months
RT @DubocDan: We were inspired by approaches like C.Origami from @BoXia7 and @artsinyc labs, which use deep learning to accurately predict….
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@tan_jimin
Jimin Tan
5 months
Our latest work CANVAS is now out! Try our self-supervised learning method to analyze spatial omics data. No cell segmentation required! GitHub:
@artsinyc
Aristotelis Tsirigos
5 months
Excited to share our latest in Nature BME! 🚀Led by @tan_jimin and with @DavidFenyo, we developed CANVAS—a vision transformer trained on single-cell spatial data to enable systematic studies of tumor heterogeneity:
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@tan_jimin
Jimin Tan
9 months
Thank you Aris! I am very lucky to have you and David as my PhD mentor! Looking forward to the next wave of biological discoveries driven by ML and AI.
@artsinyc
Aristotelis Tsirigos
9 months
Thrilled to announce that @tan_jimin successfully defended his thesis, 'Advancing Biological Modeling and Discovery through Machine Learning,' co-mentored by @DavidFenyo. Huge congratulations, Jimin! The future of AI-driven biology is bright! @NYUGSOM_PMED
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@tan_jimin
Jimin Tan
3 years
Our C.Origami paper is accepted at Nature Biotechnology. Special thanks to @BoXia7, @artsinyc and all my collaborators for their invaluable guidance and support along the way. It has been an amazing journey!.
@NatureBiotech
Nature Biotechnology
3 years
Cell-type-specific prediction of 3D chromatin organization enables high-throughput in silico genetic screening
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@tan_jimin
Jimin Tan
3 years
RT @artsinyc: C.Origami, a machine learning model for cell type-specific chromatin architecture prediction and discovery of putative regula….
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@tan_jimin
Jimin Tan
3 years
RT @BoXia7: Our C.Origami work is online @NatureBiotech! A tour de force by @tan_jimin and a wonderful collaboration with @artsinyc. Check….
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@tan_jimin
Jimin Tan
3 years
RT @kchonyc: protein structure prediction? ✅.RNA structure prediction? ✅. now, DNA structure prediction: cool work….
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@tan_jimin
Jimin Tan
3 years
Link to our preprint paper:
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@tan_jimin
Jimin Tan
3 years
RT @BoXia7: Having problems with experimental Hi-C protocol and its cost? What if you can instead do in silico Hi-C with a tool that accura….
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@tan_jimin
Jimin Tan
3 years
RT @artsinyc: Very excited to present our latest work with @tan_jimin and @BoXia7: using machine learning to predict cell type-specific chr….
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@tan_jimin
Jimin Tan
3 years
A live demo of our prediction model, C.Origami: 🤗.
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@tan_jimin
Jimin Tan
3 years
Our new study: C.Origami predicts cell type-specific 3D chromatin structures 🧬 and enables genome wide screening for crucial factors. It has been an honor working with @BoXia7 and @artsinyc in this exciting project!.Check out our website and a live demo!.
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@tan_jimin
Jimin Tan
5 years
RT @kchonyc: this is awesome! great job, team! . i just wanted to plug in a project from the capstone project last year at @NYUDataScience….
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@tan_jimin
Jimin Tan
6 years
RT @WikiResearch: Anastasios Noulas and Jimin Tan demonstrating "Wiki Atlas - Rendering Wikipedia Content through Cartographic and Augmente….
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