sabeti_lab
@sabeti_lab
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Official Twitter Account for the Sabeti Lab @Harvard & @BroadInstitute. We're currently hiring-- please see our most up-to-date positions on our website!
Harvard University and Broad Institute of MIT and Harvard
Joined May 2014
We're thrilled that Sentinel, a pandemic prevention and response program jointly led by @sabeti_lab and @christian_happi of @acegid_igh, @RedeemersUni, is the Award Recipient for @macfound's #100andChange! Learn more about the impactful award: https://t.co/JkWIhnuPm9
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Operation Outbreak is a platform for teaching about infectious disease through hands-on outbreak simulations, co-developed by our lab. This Thursday, experience it yourself through an exciting, Halloween-themed event at the Broad Discovery Center! 🧟♂️🎃
Can you survive a zombie outbreak? Join us and Operation Outbreak for a free, interactive event on October 23 from 6-8 pm for a fictional infectious disease outbreak. Enjoy face painting, music, and more while learning how infectious diseases spread. https://t.co/feRIg61K4U
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Operation Outbreak is a platform for teaching about infectious disease through hands-on outbreak simulations, co-developed by our lab. This Thursday, experience it yourself through an exciting, Halloween-themed event at the Broad Discovery Center! 🧟♂️🎃
Can you survive a zombie outbreak? Join us and Operation Outbreak for a free, interactive event on October 23 from 6-8 pm for a fictional infectious disease outbreak. Enjoy face painting, music, and more while learning how infectious diseases spread. https://t.co/feRIg61K4U
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🎉 Big congrats to Dr. Laura Luebbert (@NeuroLuebbert) , a postdoc in our lab, for receiving the 2025 FutureHouse Fellowship! We are so proud of her and excited for what's ahead! Congrats, Laura!!
Laura Luebbert @NeuroLuebbert will work with FutureHouse and the Sabeti Lab @PardisSabeti to develop AI-driven workflows to identify viral sequences in genomic and transcriptomic datasets by leveraging conserved protein motifs. Laura is known for creating gget, a widely-adopted
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We're thrilled to announce the 2025 FutureHouse AI for Science Independent Postdoctoral Fellows—six extraordinary scientists using FutureHouse tools to solve challenging scientific problems. Fellows will have access to all released and non-released agents and tools we’ve built at
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Sentinel, a @sabeti_lab & @acegid_igh partnership, has been selected as a @macfound #100andChange Finalist! Sentinel is one of five teams in the running for a $100 million grant to help solve one of the world's most critical social challenges! Learn more: https://t.co/t5DAhbwZCr
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Meet #100andChange Finalist Sentinel, one of five teams proposing a bold solution for our $100 million competition. Housed at the Sabeti Lab at the @BroadInstitute, in partnership with @acegid_igh, Sentinel seeks to transform infectious disease surveillance and response. More:
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We’re so excited to announce that we're a #100andChange Finalist! 🥳 We’re one of five teams in the running for a $100 million grant to help solve one of the world's most critical social challenges! Learn more: https://t.co/swrdtlfhiB
#100andChange #LeverforChange #SocialImpact
100andchange.org
A competition for a $100 million grant to fund a single proposal that promises real and measurable progress in solving a critical problem of our time.
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SHEIN: 7 facilities achieve TÜV Rheinland Zero Waste to Landfill certification. We are committed to reducing facility waste and keeping materials away from landfills through smart repurposing.
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Delighted to share my tribute to Christian Happi in this year’s #TIME100. A brilliant scientist, a relentless leader, and a dear friend—his work has transformed outbreak response across Africa, built a genomic powerhouse in Nigeria, and is inspiring a generation. @TIME
time.com
Find out why Christian Happi is on this year’s list
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Earlier this year, Sabeti Lab members visited 🇳🇬 to collaborate with our incredible partners at @acegid_igh on LAMP diagnostics & Lassa virus sequencing. Grateful for this impactful partnership 🌍🤝 Check out our IG for more moments from the trip!
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🎉 Huge congrats to @AriztiSanz , named a 2025 @SchmidtFellows! This global program supports early career scientists pivoting into new fields to spark innovation + drive breakthroughs. We’re so proud to see Jon leading the way! 🌍💥 read more -> https://t.co/rw1NzAHJfF
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What a month of papers! Check out the newest one on H5N1 monitoring in the thread below 🧵👇
The @SabetiLab is excited to share our @EIDjournal paper “Establishing methods to monitor H5N1 influenza virus in dairy cattle milk.” A collaboration led @ElysianTweets Follows by between @broadinstitute @MassDPH @MassDeptAgr & @CDCgov
https://t.co/nL8DX3WxtM 🧵(1/10)
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We’re excited to share the completed preprint of Delphy — our new tool for scalable, near-real-time #Bayesianphylogenetics for outbreaks! 🚀 Check it out here: https://t.co/CdGt36aBSZ Explore Delphy: https://t.co/zSwbFMQq3G Led by #PatrickVarilly @sabeti_lab @fathominfo 🧵1/16
biorxiv.org
Pathogen genomic analysis is central to tracking, understanding, and containing outbreaks, but complexity and high costs of state-of-the-art (SOTA) phylogenetic tools limit global access and impact....
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Radical Jihadists are not done. Iran promises death to America. They've built sleeper terror cells in the U.S. and support terror groups around the world – including Hamas. THE YOUNG ARE TAUGHT TO KILL JEWS AND CHRISTIANS AND THAT ISLAM MUST DOMINATE THE WORLD.
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And our @sabeti_lab #authorselfie @krithiktweets @sameed w/ the amazing #michaelmitzenmacher @_albertgu #Lyra
🧬 Meet Lyra, a new paradigm for accessible, powerful modeling of biological sequences. Lyra is a lightweight SSM achieving SOTA performance across DNA, RNA, and protein tasks—yet up to 120,000x smaller than foundation models (ESM, Evo). Bonus: you can train it on your Mac. read
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Thrilled to share our latest work—Lyra shows how principled AI design can democratize biological sequence modeling. Excited to see how this can advance biology and bring machine learning to scientists everywhere. @KrithikTweets @sameed @_albertgu, & #MichaelMitzenmacher
🧬 Meet Lyra, a new paradigm for accessible, powerful modeling of biological sequences. Lyra is a lightweight SSM achieving SOTA performance across DNA, RNA, and protein tasks—yet up to 120,000x smaller than foundation models (ESM, Evo). Bonus: you can train it on your Mac. read
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We present JUNIPER, our outbreak reconstruction tool that incorporates within-host variants, models missing data, and scales to large, sparsely sampled datasets to achieve state-of-the-art performance. Led by @ivan_specht et al. @sabeti_lab. https://t.co/pvi3boGVbh 1/12 🧵
medrxiv.org
Transmission reconstruction––the inference of who infects whom in disease outbreaks––offers critical insights into how pathogens spread and provides opportunities for targeted control measures. We...
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Closing out Black History Month with a celebration a few members of our incredible team! 🎉✨ We’re grateful for them today and every day. Check out Pardis’s thread below to learn more about their impact!🥳 ⬇️ #BlackHistoryMonth
As another Black History Month comes to a close, I wanted to take a moment to celebrate a few members who are making the @sabeti_lab a better place today - Dr. Marietou Paye, Dr. Ian Baudi, Dr. Gerald Mboowa, Tsion Abay, Dora Nabatanzi, and Geranah Nerette #BHM 🧵1/7
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Wrapping up Black History Month with a shoutout to the incredible Tomi Siyanbade! 🎉✨ Check out Pardis's thread below to see her amazing accomplishments. We're so grateful for all the time and impact she’s had in our lab! 💙
Tomi Siyanbade, a recent Harvard graduate, spent four years in @sabeti_lab and has had an impact in countless ways with her contributions to public health and education, and her beautiful spirit. We are beyond grateful for her ❤️#BlackHistoryMonth #BHM 🧵1/11
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Gratitude never goes out of style! ✨ Huge thanks to the amazing facilities, SQM, security, mailroom, and dock broadies who keep the Broad running every day. 🙌 Big thanks to Cindy for keeping this tradition alive! 💙
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🎉 Huge congrats to @AriztiSanz for winning the 2025 Imperial Alumni Award from @imperialcollege! 👏 This award honors game-changers & problem-solvers, and Jon has been just that in the Sabeti Lab & beyond! Read more ->🔗 https://t.co/dAhjqFO29i
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