Robin Andersson
@robin_andersson
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Computational genomicist. Interests include transcription and transcriptional regulation. Assoc. Prof. at Univ. of Copenhagen. @randersson.bsky.social
Copenhagen
Joined January 2011
Latest from the lab! Led by @XueningHe922, establishing a framework for interpretation of the motif syntax of regulatory elements and a quantitative model for TF cooperativity. Plenty of cool stuff revealed, including TF redundancy and synergy, and their regulatory roles!.
Excited to share DeepCompARE + ISA - a lightweight deep learning model + efficient interpretation method, to uncover rules of TF cooperativity via genome-wide in silico motif ablations! .Preprint: Github:
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🚨Job alert! 🚨. We are hiring a computational postdoc or PhD student focusing on.- modeling gene regulation using single cell data.- investigating the mechanisms of regulatory genetic variants. PhD student: Postdoc:
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Check out our latest work, scE2G, for mapping the target genes of enhancers from single cell data! See 🧵 below for highlights. Amazing work led by co-first authors @mayayayas and @613weilin in a great collaboration with @jengreitz 's lab.
Excited to share our latest preprint on scE2G – a new model to link enhancers to target genes using single-cell data – with state-of-the-art performance across multiple perturbation benchmarks. Read more below!. 1/12.
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RT @albin_san: Happy to share our joint work with the Falsig Pedersen group on how the physical microenvironment can drive cells to acquire….
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RT @RSiersbaek: Sooooo excited to share the first paper from the lab now online @NatureGenet 😀😀😀.Interested in MYC, transcriptional mechani….
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RT @BoXia7: A true curiosity-driven journey, fulfilling one of my childhood dreams! The tail loss marks a pivotal evolutionary step towards….
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RT @jamieauxillos: 7 days left to apply for our #postdoc position on RNA modifications at the University of Copenhagen!. If you’re interest….
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RT @jengreitz: An encyclopedia of enhancer-gene regulatory interactions in the human genome. Very proud—4 years in….
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RT @CedricFeschotte: “Transposable elements contribute to nearly 80% of human-specific candidate cis-regulatory elements in cortical cells”….
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RT @AMathelier: 🧬Opening for a postdoc in my group @NCMMnews @UniOslo @UniOslo_MED @unioslo_mn to generate deep learning models to enhance….
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RT @Anders_S_Hansen: Come and join us!.We are looking to recruit a Research Assistant/Technical Associate I to join our team Summer 2024.….
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RT @enhpathy_H2020: Congratulations to all our students who have done an excellent work as part of our @HorizonEU network over the last 3 y….
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RT @enhpathy_H2020: Two training sessions on communication, led by @AlberichJorda , kick off our final event this afternoon. See our progr….
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RT @groth_anja: Histone inheritance is required for epigenome maintenance and early embryonic development! Out in @NatureGenet
https://t.co….
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This will be my (academic) home during the fall. On a sabbatical at the Broad, kindly hosted by @kasper_lage and the @novonordiskfond center for genomic mechanisms of disease. Looking forward to lots of interactions and awesome science! Reach out if you want to meet up!
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Super excited to share our study on the importance of proper epigenetic inheritance for cell identity and developmental competence, a fantastic collaboration with @groth_anja and @josh_brickman, led by @AliceScientist, @BiranAlva, @NicoAlc82, @albooo87
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RT @josh_brickman: As a student we were taught, “no experiments could show chromatin did more than salt,” but now with the amazing @groth_a….
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RT @jespergrud: 📢 PREPRINT ALERT 📢 Clustering cells is a key step in most scRNA-seq analysis workflows. It's hard, and harder with batch ef….
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RT @VintherJeppe: We are excited to share our study on the 5'FAD capping of #HCV RNA, which is out today in @Nature. The work is a close co….
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