METASPACE cloud platform for spatial metabolomics Profile
METASPACE cloud platform for spatial metabolomics

@metaspace2020

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Engine for metabolite annotation for imaging mass spectrometry + open knowledge base of spatial metabolomes

Europe
Joined November 2015
Don't wanna be here? Send us removal request.
@metaspace2020
METASPACE cloud platform for spatial metabolomics
7 years
Like #Metabolomics + imaging #MassSpectrometry + #BigData + #Hipster style?
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
3 months
RT @metaspace2020: 💡 Thinking of a feature, improvement, or enhancement we should consider?. We’ve created an Ideas template to make it eas….
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github.com
💡 Feature Idea Template We’re excited to hear your ideas for making METASPACE even better! Please copy and fill out the sections below when sharing a feature request or idea. 🧩 Feature Name A...
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
3 months
💡 Thinking of a feature, improvement, or enhancement we should consider?. We’ve created an Ideas template to make it easy for you to share suggestions. 💬Share your idea or upvote an existing one here: Looking forward to your contributions. #ideas.
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github.com
💡 Feature Idea Template We’re excited to hear your ideas for making METASPACE even better! Please copy and fill out the sections below when sharing a feature request or idea. 🧩 Feature Name A...
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
3 months
RT @metaspace2020: 🚀 2 weeks ago, METASPACE joined the @nf_core hackathon — now we have 2 public modules & an accepted pipeline proposal!….
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
3 months
🚀 2 weeks ago, METASPACE joined the @nf_core hackathon — now we have 2 public modules & an accepted pipeline proposal! 🎉. 👉 Interested in contributing ? Check out the pipeline proposal and get involved: #METASPACE #nextflow #spatialmetabolomics
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
4 months
RT @metaspace2020: 🚀 Missed our webinar? Watch the recording here! 🎥. We kicked off our webinar series with latest METASPACE features and b….
www.youtube.com
Our first webinar covering an introduction to METASPACE, latest features and best practices.
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
4 months
🚀 Missed our webinar? Watch the recording here! 🎥. We kicked off our webinar series with latest METASPACE features and best practices. Watch the full webinar here: This is just the beginning—stay tuned for more! 🚀. #METASPACE #Webinar.
www.youtube.com
Our first webinar covering an introduction to METASPACE, latest features and best practices.
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
4 months
⏳ Just one day to go! ⏳. Join us in our first webinar for insights on the latest features, best practices, and a live Q&A. 🔗 Register here: Looking forward to seeing you there! 🚀.
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www.eventbrite.com
Learn the top tips and tricks for identifying metabolites in Imaging MS using METASPACE - the ultimate guide for metabolite annotation!
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
5 months
RT @metaspace2020: Did you know that METASPACE Converter allows you to seamlessly transform your dataset into AnnData or SpatialData object….
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github.com
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData - metaspace2020/metaspace-converter
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
5 months
Did you know that METASPACE Converter allows you to seamlessly transform your dataset into AnnData or SpatialData objects ( @scverse_team ) ?. Check it out and let us know how it works for you :
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github.com
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData - metaspace2020/metaspace-converter
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
5 months
🔍 Did you know that you can select Regions of Interest (ROIs) in METASPACE?. We’ll be sharing more tips and best practices in our upcoming webinar on March 12 — Join us to learn more!.
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
5 months
📢 We're launching how-to guides for METASPACE!. Powered by these step-by-step guides make it easier to navigate METASPACE features. Check out our first guide on group creation : What features you'd like us to cover next ?.
app.guidde.com
This guide will walk you through the simple steps to create and set up a group on METASPACE. From adding a description to managing members and sharing
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
5 months
What tool should METASPACE integrate with?. Whether it's for preprocessing, visualization, or functional analysis. We want to know what tools, platforms, or pipelines would make METASPACE even more powerful for your research?. Drop your ideas in the comments! 👇
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
6 months
Ready to take your metabolite annotation to the next level?. Join our first FREE webinar on Best Practices for Metabolite Annotation in Imaging MS with METASPACE! . 🔗 Register now: #Metabolomics #MassSpec #Bioinformatics #METASPACE.
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www.eventbrite.com
Learn the top tips and tricks for identifying metabolites in Imaging MS using METASPACE - the ultimate guide for metabolite annotation!
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
6 months
🎆 New Year, New Goals! 🎆. Kicking off 2025 with more engagement. Jump into METASPACE Discussions – your space to connect, provide feedback, and share ideas💡. Join the community !!
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github.com
Explore the GitHub Discussions forum for metaspace2020 metaspace. Discuss code, ask questions & collaborate with the developer community.
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
9 months
RT @thalexandrov: So great to see cutting-edge imaging MS data shared on @metaspace2020: a recent publication from the Janfelt lab on 12 u….
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
11 months
We've processed 50.000’th dataset on 🍾 50TB of centroided imzML/ibd files from ~0.5 PB of profile data. 120+ million of metabolite annotations. Continuing hard work of @alexandrovteam, alumni, collaborators, early adopters & hundreds of users 👏🙏
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
1 year
RT @kevinzemaitis: Dusan, Chris (@The_AnderPLANTS), and myself had a very engaging #ASMS2024 with a lot of interest in our protocol for EDC….
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www.protocols.io
Herein, we outline the protocol for application of 4-(2-((4-bromophenethyl)dimethylammonium)ethoxy)benzenaminium dibromide (4-APEBA) which we have previously demonstrated to be...
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
1 year
RT @thalexandrov: @metaspace2020 @VSaharuka @alexandrovteam @The_AnderPLANTS @livia__se @mliebeke This open & accessible resource will be u….
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
1 year
RT @thalexandrov: @metaspace2020 @VSaharuka @alexandrovteam I would like to extend thanks and thumbs up to all our collaborators from 9 oth….
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@metaspace2020
METASPACE cloud platform for spatial metabolomics
1 year
RT @thalexandrov: @metaspace2020 Wrapping up, I’d like to highlight the efforts of @VSaharuka and all authors @alexandrovteam. It was a tru….
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