Igor Snapkow
@ISnapkov
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MD with a scientific background in immunology and molecular biology, currently discovering a magic world of immunotoxicology.
Oslo, Norway
Joined July 2018
Curious about the performance of bottom-up mass spectrometry for antibody sequencing? A new preprint is out presenting our mass spectrometry benchmarking efforts in a controlled setting simulating the polyclonal serum environment. (1/8) https://t.co/WTc2BvnNcz
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Many congratulations to @HellandAslaug who is awarded the prestigious King Olav V’s Prize for Cancer Research 2023 by @Kreftforeningen Very well deserved!!! https://t.co/G7CIJ4Ao7j
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🗣️ Last month, over 145 people connected online for a special workshop on human health risk assessment frameworks for #microplastics and #nanoplastics. ✅ Check out our latest blog post summarizing the event and listing all resources available! ➡️ https://t.co/NKkbP5VikN
#MNPs
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Mark your calendar for the 3️⃣rd workshop in our @CuspResearch series on the health risk assessment of #microplastics and #nanoplastics! 📆 21 April, 9AM - 2:30PM CET 📌 Online ℹ️ Register today at https://t.co/i5RJwRQ4Xr
#MNPs
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.@ciel_tweets's new analysis dives into the health impacts of invisible #microplastics and #nanoplastics in the air. ➡️ Read the full report at https://t.co/FmiUXDSwWF
#MNPs
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Check out the flyer for our POLYRISK project @PolyriskScience! Our team is working hard to develop cutting-edge methods for sampling, exposure analysis, and risk assessment of micro- and nanoplastics. Stay tuned for updates! #microplastics #nanoplastics
🔍 #Microplastics & #nanoplastics can be found everywhere in our environment, from synthetic rubber tires to our clothes. ✅ @PolyriskScience’s new flyer shows how we're advancing the science on how #MNPs might impact people's health and immune system ➡️ https://t.co/7RYVA9pyok
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. @pandaisikit, @probertimmodels, @victorgreiff and colleagues introduce the Absolut! framework, which can generate synthetic 3D-antibody-antigen structures to assist machine learning and dataset construction for antibody design. https://t.co/OaSbqtF5Pb 👉 https://t.co/7GTf7zcvUA
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Hi Twitter, come join our @PolyriskScience community on LinkedIn! 👋 👉 Find out more at https://t.co/VRVJvpNppU
#Microplastics #Nanoplastics #MNPs
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Very happy to share our perspective piece on how linguistics may help improve the interpretability of protein language models. https://t.co/UFydYda8cr. Great collab with the @SandveGeir and Dag Haug labs. Project led by the super talented @MaiSpaceHa. Tweetorial in 🧵below.
Happy to share my first preprint in the Immunolingo project “Advancing protein language models with linguistics: a roadmap for improved interpretability”, a perspective on adapting LMs for protein sequences with the help of linguistic knowledge. https://t.co/5U1nzoYdR5
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Our researchers getting into the details: sample collection and testing. POLYRISK analyses particles in artificial turf, textiles and drinking water from plastic bottles and the real-life effects those may have on the human body and our health. #microplastics #nanoplastics
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Some impressions of day 1 of the @PolyriskScience General Assembly, talking #microplastics and #nanoplastics research. Our common goal is understanding human exposure and health hazards of micro- and nanoplastic contaminants in our environment.
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I would also like to thank all Antibody repertoire benchmarking project team 🙏☺️ @victorgreiff Tuula Nyman @ISnapkov @sachinPCFOUS Maria Stensland @ATGTAC @KhangLeQuy
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We are excited for the POLYRISK General Assembly, starting today - we will hear from the work packages within the project, and we will finally have the opportunity to meet all project partners in person! Find out more about the POLYRISK project here: https://t.co/pAOOjSoMx8
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Happy to share our work on multi-dimensional comparison of immune repertoires. Amazing work by @cedricrweber. Great collaboration with Xiao Liu, @ReddyLab_ETHZ, @mkuijjer, and, as always, @SandveGeir. Main findings in 🧵. https://t.co/5ID0ttPkeP.
biorxiv.org
B- and T-cell receptor (immune) repertoires can represent an individual’s immune history. While current repertoire analysis methods aim to discriminate between health and disease states, they are...
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A unique opportunity to study the immune-related effects of micro- and nanoplastics is available at the Norwegian Institute of Public Health (FHI). Please, spread the word! https://t.co/hpXPIE9rEZ
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Very happy that @immuneml is now in and on the cover of @NatMachIntell. Fantastic collaboration with the @SandveGeir lab. Amazing work by the lead authors @milenapavl and @LonnekeScheffer. (Cover art by @pandaisikit and @LonnekeScheffer).
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@immuneml is now published in @NatMachIntell! Thanks to everyone who contributed! 🎉 https://t.co/nUqemAnt08
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We just released CompAIRR – a tool that reduces greatly the longstanding computational bottleneck of identifying shared identical and similar sequences among large sets of immune repertoires. All the details/links are in the thread below. Feedback is very welcome! @airr_community
We are happy to report a dramatic speedup for one of the core computations for adaptive immune receptor repertoire (AIRR) analysis - the discovery and counting of receptors that overlap between repertoires! Check out our CompAIRR method: https://t.co/U5Sn442upv 1/7
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Very happy to see that our review on "Progress and challenges in mass spectrometry-based analysis of antibody repertoires" is out in @TrendsinBiotech. https://t.co/4l8pYAXFXr. Led by @ISnapkov @mchernigovskaia @ATGTAC @KhangLeQuy and in collab with @PCFOUSOslo (Tuula Nyman).
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Happy to share our preprint: "A billion synthetic 3D-antibody-antigen complexes enable unconstrained machine-learning formalized investigation of antibody specificity prediction" https://t.co/56rffLJfwk Check out Absolut! database+software to simulate more https://t.co/Y0LZcIE9VW
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