Explore tweets tagged as #metabarcoding
@rghaderi294
Reza Ghaderi
10 days
Are we ready to use long-read metabarcoding for analysis of nematode communities? If you are interested, read our paper in Soil Biology & Biochemistry: https://t.co/wEX6y97CNO
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@theBentoLab
Bento Lab 🧬
1 year
For anyone interested in DNA barcoding or metabarcoding nematodes, here’s a new forward degenerate primer for CO1/COX1 barcoding that has increased species recovery and superior amplification compared to three commonly used nematode CO1 primer sets, by Ren et al. (2024). 👇 Ren
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@EcographyJourna
Ecography
2 months
A systematic review evaluating the performance of eDNA methods relative to conventional methods for biodiversity monitoring https://t.co/VMdLY6FCMX #eDNA #Metabarcoding
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@theBentoLab
Bento Lab 🧬
11 months
For aquatic eDNA enthusiasts, here’s an interesting and useful review of the last 10 years in the field by Takahashi et al. (2023), covering 407 articles and including 522 single-species primers and 141 metabarcoding primers. This could be a good article to read if you want:
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@CBG_UofG
Centre for Biodiversity Genomics (CBG)
1 month
🌍 Project Highlight – BIOSCAN African Parks In collaboration with African Parks, BIOSCAN is working to document insect diversity across Africa using a metabarcoding approach on bulk insect samples collected through passive Malaise traps. 🌐 Learn more: https://t.co/VgTp4ik75z
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@FrontMarineSci
Frontiers - Marine Science
3 days
New Research: eDNA metabarcoding for qualitative and semi-quantitative assessment of phytoplankton towards eco-sustainable mariculture in the Mediterranean Sea https://t.co/ClFcVSMS18 #FrontiersIn #MarineScience
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@kirstenjharper
Dr. Kirsten J Harper
1 year
Ended morning session with @Llewelyn68 from @JamesHuttonInst speak on #eDNA metabarcoding to explore microbial diversity & use as a diagnostic tool for plant biosecurity, shared newly published bioinformatic pipeline and urges the use of appropriate controls! #SFG111
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@multicellgenome
Iñaki Ruiz-Trillo
10 months
🔬 Exciting new resource for #protists lovers! 🌍🧬🦠 We are obsessed with trying to get the unknown lineages closely related to animals. Very obsessed! So, we created the eKOI database to expand the power of metabarcoding to COI, with a special focus on protists & integrated in
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@naturemethods
Nature Methods
26 days
CORAL infers the occurrence of rare species based on common species, using DNA metabarcoding data and biodiversity data. https://t.co/lcvmzhGcZQ
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@Physacourses
Physalia-courses@ONLINE
1 month
Learn eDNA metabarcoding with @nanopore ! 🧬💻 Hands-on online course covering lab workflows & bioinformatics—turn samples into real biodiversity insights. #eDNA #longreads #Nanopore https://t.co/5ubuFC9ZUt
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@MethodsEcolEvol
Methods in Ecology and Evolution
22 days
📖Published📖 Chen et al. comprehensively evaluate the efficacy of invertebrate metabarcoding primers in (e)DNA-based biodiversity assessments in both freshwater and marine habitats 🪳 🧬 Find out more here 👇 https://t.co/pQCS89aubk
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@CBG_UofG
Centre for Biodiversity Genomics (CBG)
3 months
Take a look at the smiling faces from last week's barcoding and metabarcoding course! Training was led by CBG staff members Dr. Ken Thompson and Dr. Robin Floyd and was hosted at Universidad Nacional Mayor de San Marcos (UNMSM). 📷 Photo by Karyn Soto
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@NEBiolabs
New England Biolabs
19 days
Metabarcoding can take a panoramic view of biodiversity from complex DNA samples and accurately inform us about individual species. In our latest blog ( https://t.co/ywiDPCICTW), learn how Nattanon Meeprom, Ph.D., surmounted sample challenges to accelerate data collection as part
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@InsSociaux
Insectes Sociaux
2 months
New short communication! 📄 Drinkwater, @WaspWoman et al. used DNA metabarcoding to analyze the gut contents of 554 wasp larvae, revealing their diverse diet and their role as predators 🐝 🔗 https://t.co/HV9GuVDPd7 #SocialInsects #WaspEcology #NativeEcosystems #Vespula
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@oliviaruppert_
Olivia Ruppert
9 months
My first first-author publication is out now in Environmental DNA! The first portion of my MS project focused on comparing sampling methodology for eDNA metabarcoding for reptiles and amphibians in wetlands. 🧬 🐸
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@fonamental
Javier del Campo
6 months
ORDNA: Deep-learning-based ordination for raw environmental DNA samples #eDNA #metabarcoding https://t.co/4UVlLPWTqr
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@theBentoLab
Bento Lab 🧬
1 year
🕊️ Dispatch from our correspondents in Brazil #iBOL2024 We're enjoying the 9th @iBOLConsortium conference – a week full of DNA barcoding and metabarcoding! A beautiful place to be talking about biodiversity.
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@amelia_corvin
Amelia Corvin-Czarnodolski
1 year
Excited to present my MScRes project as a poster (39) at #CoimbraSeabirds this evening - using DNA Metabarcoding of buccal and cloacal swabs in combination with Stable Isotope Analysis to study adult guillemot diet on Puffin Island 🧬 🐟 🐧 Come and say hi! 👋🏼 @TheSeabirdGroup
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@ekoevoder
EkoEvo
1 year
We end the evolutionary genomics session with Aysegül Er Gökçe’s talk on metabarcoding of ancient samples from the Aegean and Mediterranean.
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