
Erika Alden DeBenedictis
@erika_alden_d
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CEO of @Pioneer__Labs, founder of @Align_Bio, resident @AsteraInstitute Former astronomer 🌎 recovering computer scientist 🤖 current molecular biologist 🧬🧪
California, USA
Joined October 2008
How much data do we need to train protein language models that can predict experiments? . TLDR: we need to be much smarter about WHAT data to acquire.🧠 New years of data in the UniRef sometimes help. or hurt! . Check out @AvivSpinner's new paper!.
3/5 We find performance does not improve monotonically as more data is used at train time! Some years of added data help, others hurt. The models are sensitive y'all. We haven’t hit data saturation yet. Full paper here:
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Going rogue! I love it 💪.
The MLSB workshop will be in San Diego, CA (co-located with NeurIPS) this year for its 6th edition in December 🧬🔬. Stay tuned @workshopmlsb as we share details about the stellar lineup of speakers, the official call for papers, and other announcements!🌟
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RT @Align_Bio: Just over a week left to apply: Align is hiring a Scientist to run and improve GROQ-seq at NIST (Gaithersburg, MD). Build in….
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RT @Align_Bio: Just over a week left! We’re hiring a Research Associate to help run GROQ-seq at BU’s @DAMPLab. High-impact, automation-driv….
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An AI-ready lab notebook for life science doesn't need to be complex or expensive. At @Pioneer__Labs, we use a lab management system built entirely with generic software tools. It's simple, cheap, and easy to modify. See our now how-to post ⬇️
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RT @sonofalli: ever since I was a little girl I always dreamed of spending all day in one of these
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RT @BiologyAIDaily: A Data Guided Approach To Building An ML Ready Protein Expression Dataset. A new project aims to create an openly avail….
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It's actually wild that protein engineering is this global!!. Looking at the registrants, damn, this is gonna be fascinating!!! 🍿👀😃.
The 2025 Protein Engineering Tournament didn’t just take shape, it practically folded itself overnight - and registration goes until Oct 17! .Already:.✅ 94 teams.🌍 20 countries spanning 5 continents. This week's signups: @nvidia, @UWproteindesign, @EliLillyandCo,.
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RT @AsteraInstitute: “Mars is galactic gardening for beginners”. Astera Resident @EdwinKite is building a modern research agenda for terraf….
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RT @Pioneer__Labs: What are we building? Follow along with our open science updates and read about our first target microbe for Mars. https….
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If you want Align to tag you in social posts, let us know! Email tournament@alignbio.org. More discussion = more community = better learnings 💪
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FAQ: Is the Tournament anonymous? . Here's how it works: ⬇️.
1/4.🚀 Announcing the 2025 Protein Engineering Tournament. This year’s challenge: design PETase enzymes, which degrade the type of plastic in bottles. Can AI-guided protein design help solve the climate crisis? Let’s find out! ⬇️. #AIforBiology #ClimateTech #ProteinEngineering
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By this time next year, either: . 🏆 we'll have engineered PETase enzymes actually work industrially & recycle plastic. or we'll know that AI-for-proteins is still a bit underbaked 😜. Excited to see what happens!!!! 😬 . Spread the word ⬇️.
1/4.🚀 Announcing the 2025 Protein Engineering Tournament. This year’s challenge: design PETase enzymes, which degrade the type of plastic in bottles. Can AI-guided protein design help solve the climate crisis? Let’s find out! ⬇️. #AIforBiology #ClimateTech #ProteinEngineering
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