enviPath
@enviPath
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enviPath was first published in 2016. Since then, we have introduced substantial functionality enhancements and updates.We’ve summarized these advancements in our latest update paper. Check it out here: https://t.co/PapMJ81Bsa
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New publication alert! 'Making waves: Enhancing pollutant biodegradation via rational engineering of microbial consortia' https://t.co/JNSeuWz441
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New publication alert! 'Systematic Handling of Environmental Fate Data for Model Development─Illustrated for the Case of Biodegradation Half-Life Data' https://t.co/ROQ7P7avbP
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New data package: EAWAG-SLUDGE ! EAWAG-SLUDGE contains biotransformation data from activated sludge experiments extracted from 27 scientific articles, including our own paper by Trostel et al. (2023) https://t.co/CF9Fsac6H8
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New publication alert! “enviRule: an end-to-end system for automatic extraction of reaction patterns from environmental contaminant biotransformation pathways” https://t.co/TMxL9Ib3Ma
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New publication alert! ‘Combining predictive and analytical methods to elucidate pharmaceutical biotransformation in activated sludge’ https://t.co/lDRgDlFxi5
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@enviPath It was great to be there (so many familiar faces) - here's the link to our slides with @pubchem & @lcs
https://t.co/zEiDAYWbog
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Throwback Tuesday! The whole enviPath team was present at the International Conference on Chemistry and the Environment 2023 in Venice. We organized a workshop around the enviPath platform, featuring talks regarding databases, predictive models, and applications of enviPath.
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Throwback Tuesday! As part of the enviPath+ project, we aim to bring the enviPath platform to a new level. We held a scoping workshop in July to understand how to best meet the needs of our users and collaborators. We thank the participants for their valuable inputs!
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Just presented this overview at the @enviPath workshop on behalf of Tiejun, @EvanBolton and @pubchem and LCSB-ECI teams. #OpenScience #cheminformatics @lcsb_uni_lu @FnrLux @ZeroPM_H2020 Reaction Data in @pubchem Slides: https://t.co/dGq0XFkVvS Sneak peek (lots of hyperlinks):
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Our new automatic rule extraction tool enviRule - extract transformation rules directly from your data set. Soon available in enviPath: https://t.co/irUQSZgbvX
academic.oup.com
AbstractMotivation. Transformation products (TPs) of man-made chemicals, formed through microbially mediated transformation in the environment, can have se
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new: "Combatting over-specialization bias in growing chemical databases" https://t.co/iyebCYuNX6
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How do we identify and overcome over-specialization #bias in chemical databases? Check Katharina Dost's latest publication, joint work with @zacmps, Liam Brydon, Kunyang Zhang, Jasmin Hafner, and Pat Riddle. #cheminformatics
https://t.co/MLQf7QEmKu
https://t.co/xRWhA1Lg9V
link.springer.com
Journal of Cheminformatics - Predicting in advance the behavior of new chemical compounds can support the design process of new products by directing the research toward the most promising...
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Application deadline approaching for two positions to further develop @enviPath, our internationally unique online resource on contaminant biotransformation. Assistant in chemical data science: https://t.co/pdwBXSJNk0 Postdoc in Computational Metabolomics: https://t.co/cWsPBf2au5
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Join us at ICCE 2023 in Venice! We are planning a satellite event at ICCE 2023 - we will introduce enviPath, with theory sessions and hands-on exercises. We will also have an exciting list of speakers! Register now - more updates soon! https://t.co/IpNVHzacDp
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Announcing two positions to make @enviPath THE ORD resource on contaminant biotransformation, to be filled ASAP, at @UZH & @EawagResearch. Research assistant in chemical data science: https://t.co/pdwBXSKl9y Postdoc in Computational Metabolomics: https://t.co/cWsPBf2IjD
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EAWAG-SLUDGE, our latest addition to the enviPath database, is now available at https://t.co/knIqyK5zBQ. It features biodegradation pathways and kinetic information for 91 micropollutants commonly detected in wastewater treatment plants.
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Our paper on the holistic evaluation of predicted biodegradation/metabolism pathways with our partners @enviPath @MLAucklandUni appeared in @jcheminf. Dealing with problems like transient intermediates that are missing in the experimental reference data, or multi-step reactions.
new: "Holistic evaluation of biodegradation pathway prediction: assessing multi-step reactions and intermediate products" https://t.co/RSM1WMN1iP
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new: "Holistic evaluation of biodegradation pathway prediction: assessing multi-step reactions and intermediate products" https://t.co/RSM1WMN1iP
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We will add a new evaluation feature to enviPath shortly - Multi-Generation Evaluation. Our preprint is available @ChemRxiv: https://t.co/B92hSghwMP
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