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Systematic Biology Programme Profile
Systematic Biology Programme

@SystBio_UU

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The Systematic Biology Program at Uppsala University covers genomics, bioinformatics, phylogenetics, taxonomy, ethnobotany and conservation.

Uppsala, Sverige
Joined April 2016
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@SystBio_UU
Systematic Biology Programme
10 months
Anders Alfjorden successfully defended his PhD thesis titled "Morphological and molecular studies of bivalves to assess the hidden diversity of protistan parasites: investigations of cryptic diseases in shellfish." We at @SystBio_UU are so happy and proud of his accomplishments!
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@SystBio_UU
Systematic Biology Programme
10 months
Publication alert by @OMPalacios7: Learn about the impact of repetitive DNA on insect adaptation and speciation.
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@grok
Grok
19 days
"A stylish woman in a beige coat walking confidently past a moving train at a modern train station.". Create images and videos in seconds with Grok Imagine.
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@SystBio_UU
Systematic Biology Programme
10 months
A press release about Anders Alfjorden's PhD thesis has been published by the Swedish Veterinary Agency. Anders will defend his thesis this Friday at EBC, making @SystBio_UU proud of his achievements as a PhD student.
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@SystBio_UU
Systematic Biology Programme
11 months
Exciting study on the Vandiemenella viatica morabine grasshoppers, including SystBio members. The authors generated a high-quality genome for the ancestral karyotype, revealing 19,034 protein-coding genes and insights into sex chromosome evolution.
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nature.com
Scientific Data - Chromosome-level genome assembly of the morabine grasshopper Vandiemenella viatica19
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@SystBio_UU
Systematic Biology Programme
11 months
The first report on Hexamita nelsoni a Diplomonad trophozoite parasite in Blue mussels. By Anders Alfjorden and @fburki from @SystBio_UU .
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@SystBio_UU
Systematic Biology Programme
1 year
RT @NewPhyt: High rate of gene family evolution in proximity to the origin of #ectomycorrhizal symbiosis in #Inocybaceae. đź“– .
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@SystBio_UU
Systematic Biology Programme
1 year
RT @biodivlab: Exciting Opportunity in Spatial Biodiversity Modeling!.We are thrilled to announce a fully funded, 4-year PhD position in sp….
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uu.varbi.com
The Department of Organismal Biology teaches and explores the evolution, development and function on the organismal level. For more information see www.iob.uu.se . The Department is now looking for a
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@SystBio_UU
Systematic Biology Programme
1 year
Here the link to the interactive map:
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@SystBio_UU
Systematic Biology Programme
1 year
Preprint alert (by @TobiasAndermann et al): Here we apply a deep-learning segmentation model to identify parts of Swedish forests with high biodiversity value. Check out the interactive map showing model predictions of unprecedented resolution and accuracy
researchsquare.com
Biodiversity loss is an increasingly intensifying global crisis with significant societal, political, and financial implications. However, our understanding of biodiversity remains limited due to...
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@SystBio_UU
Systematic Biology Programme
1 year
Gene transfers have been critical to the origin and evolution of endosymbiotic organelles. But just how much, and what are the challenges with detecting them. @fburki co-authored this book chapter that delves into these questions.
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link.springer.com
Endosymbiotic gene transfer (EGT), the transfer of endosymbiont genes to the host nucleus, is considered a fundamental process of plastid endosymbiosis. Together with retargeting of the protein...
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@SystBio_UU
Systematic Biology Programme
1 year
Experimental models to study the evolution of primary sex-determining loci are scarce. This study led by Xuan Li shows that male-determining loci on polymorphic proto-Y chromosomes of the housefly can genomically diverge into regions of various complexity.
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nature.com
Nature Communications - For sexually reproducing organisms, experimental models to study the evolution of primary sex-determining loci are scarce. This study shows male-determining loci on proto-Y...
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@SystBio_UU
Systematic Biology Programme
1 year
New paper alert: @fburki and collaborators published this article on benchmarking long read sequencing of the entire RNA operon for environmental samples, using a fully controlled mock community for this evaluation.
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onlinelibrary.wiley.com
The use of short-read metabarcoding for classifying microeukaryotes is challenged by the lack of comprehensive 18S rRNA reference databases. While recent advances in high-throughput long-read...
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@SystBio_UU
Systematic Biology Programme
1 year
New paper: @TobiasAndermann and collaborators published a biogeographic study on Himalayan spiny frogs, using them as a model system to infer plausible geological scenarios for the formation of the Himalayas and the connected uplift of the Tibetan plateau .
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onlinelibrary.wiley.com
The Cenozoic topographic development of the Himalaya-Tibet orogen (HTO) substantially affected the paleoenvironment and biodiversity patterns of High Asia. However, concepts on the evolution and...
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@SystBio_UU
Systematic Biology Programme
1 year
Did you know there are biologists working on starships, including our @Hulk_Vogan? In case you want to learn more about this topic, here is a podcast about this intriguing new line of research posted by Aaron's collaborators: and
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@SystBio_UU
Systematic Biology Programme
1 year
RT @fburki: We've just published a comparative genomic analysis of Ascetosporean parasites (Rhizaria). We produced genomic data for two add….
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@SystBio_UU
Systematic Biology Programme
2 years
RT @biodivlab: 📢 PostDoc Opportunity at Uppsala University! 🌿. Join our Biodiversity Data Lab ( and delve into meta….
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uu.varbi.com
The Department of Organismal Biology teaches and explores the evolution, development and function on the organismal level. For more information see www.iob.uu.se . The position is placed within the
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@SystBio_UU
Systematic Biology Programme
2 years
We are sad to announce that our long-standing colleague Inga Hedberg has passed away after many decades of dedicated research work at Systematic Biology. You will be missed by all of us!.
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@SystBio_UU
Systematic Biology Programme
2 years
RT @TobiasAndermann: Here we estimate the number of recent bird extinctions, including those that have gone unnoticed due to a lack of data….
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amp.theguardian.com
About 12% of birds have died out as result of human activity in past 120,000 years, say scientists
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