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Sydney Covitz Profile
Sydney Covitz

@SydneyCovitz

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154
Following
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52

Senior Neuroinformatics Software Engineer @ PennLINC | Lifespan Brain Institute of UPenn & CHOP | Neuroimaging, Big Data, Python | Creative Writer | she/her

Joined June 2021
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@SydneyCovitz
Sydney Covitz
2 years
RT @ArielleKeller: New preprint! Our brains don’t develop in a vacuum, but enmeshed in a complex web of experiences+environments. How can w….
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biorxiv.org
Our minds and brains are highly unique. Despite the long-recognized importance of the environment in shaping individual differences in cognitive neurodevelopment, only with the combination of deep...
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@SydneyCovitz
Sydney Covitz
2 years
SUCH impressive work from @kahini_mehta & team!!!.
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@SydneyCovitz
Sydney Covitz
2 years
RT @sattertt: Thrilled to share awesome new work from the ever-stellar Dr. Erica Baller (not on twitter) + our friends at @Penn_SIVE : “​​”….
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medrxiv.org
Importance Multiple sclerosis (MS) is an immune-mediated neurological disorder that affects nearly one million people in the United States. Up to 50% of patients with MS experience depression....
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@SydneyCovitz
Sydney Covitz
2 years
RT @sattertt: Beyond thrilled to report that @valerieJsydnor is now Dr. @valerieJsydnor!! An astonishingly high-caliber presentation focus….
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@SydneyCovitz
Sydney Covitz
2 years
SO PROUD @so_whitehouse.
@so_whitehouse
Sophie Whitehouse
2 years
this is kewl 🍀 so honoured.
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@SydneyCovitz
Sydney Covitz
2 years
RT @pineurosci: Got one into neuron! LMK if you don't have access, but here's the link and I'll explain why I thin….
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@SydneyCovitz
Sydney Covitz
3 years
Check out this incredibly impressive preprint by my super talented colleague and friend @kahini_mehta!.
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@SydneyCovitz
Sydney Covitz
3 years
VOTE @so_whitehouse for player of the week!!!!!.
@BarclaysWSL2
Barclays WSL 2
3 years
Make sure to get your vote in 🙌.
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@SydneyCovitz
Sydney Covitz
3 years
Exciting opportunity to work in Sweden with my brilliant colleague and friend. Any prospective postdocs interested in clinical memory research and neurodegenerative diseases should DEFINITELY apply!.
@_JakeVogel_
Jake Vogel
3 years
‼️Postdoc opportunity‼️ Please RT 🙏. Are you interested in:.* Neurodegenerative disease.* Multi-omic analysis.* Machine learning/AI.* Neuroimaging. Come work with me and the whole BioFINDER team!.Apply here: A quick thread about the position 👇.
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@SydneyCovitz
Sydney Covitz
3 years
RT @ArielleKeller: Super excited to share our new review article, “Hierarchical functional system development supports executive function”….
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@SydneyCovitz
Sydney Covitz
3 years
RT @_JakeVogel_: ‼️ Preprint alert ‼️ "Conserved whole-brain spatiomolecular gradients shape adult brain functional organization" https://t….
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@SydneyCovitz
Sydney Covitz
3 years
Additional thank yous go out to our wildly talented set of co-authors, early adopters, and current users, including our incredible teams at @PennMedicine and @ChildrensPhila, along with @DrDamienFair's @UMNews group and @MilhamMichael's at @childmindinst.
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@SydneyCovitz
Sydney Covitz
3 years
I would like to give a massive shout out to @sattertt and @CieslakMatt for their mentorship and guidance throughout every stage of this project. Few people are lucky enough to receive one outstanding and brilliant role model during their first job, and I wound up with two.
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@SydneyCovitz
Sydney Covitz
3 years
The documentation for CuBIDS is available at and our package is available for download on the Python Package Index (@pypi)
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pypi.org
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
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@SydneyCovitz
Sydney Covitz
3 years
CuBIDS also helps users summarize, categorize, and visualize the #metadata heterogeneity present in their #BIDS data, test #pipelines on their dataset's entire parameter space, and perform metadata-based quality control.
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@SydneyCovitz
Sydney Covitz
3 years
CuBIDS includes a robust implementation of BIDS validation that scales to large samples and incorporates .@datalad––a version control software package for data––to ensure #reproducibility and provenance tracking throughout the CuBIDS curation workflow.
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@SydneyCovitz
Sydney Covitz
3 years
CuBIDS is a #neuroinformatics workflow and #OpenSource, #Python-based software package designed to facilitate #reproducible curation of neuroimaging data.
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@SydneyCovitz
Sydney Covitz
3 years
We are thrilled to announce that our paper, "Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets," was just published in NeuroImage! 💻🧠
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