
Sydney Covitz
@SydneyCovitz
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Senior Neuroinformatics Software Engineer @ PennLINC | Lifespan Brain Institute of UPenn & CHOP | Neuroimaging, Big Data, Python | Creative Writer | she/her
Joined June 2021
RT @ArielleKeller: New preprint! Our brains don’t develop in a vacuum, but enmeshed in a complex web of experiences+environments. How can w….
biorxiv.org
Our minds and brains are highly unique. Despite the long-recognized importance of the environment in shaping individual differences in cognitive neurodevelopment, only with the combination of deep...
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RT @sattertt: Thrilled to share awesome new work from the ever-stellar Dr. Erica Baller (not on twitter) + our friends at @Penn_SIVE : “”….
medrxiv.org
Importance Multiple sclerosis (MS) is an immune-mediated neurological disorder that affects nearly one million people in the United States. Up to 50% of patients with MS experience depression....
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RT @sattertt: Beyond thrilled to report that @valerieJsydnor is now Dr. @valerieJsydnor!! An astonishingly high-caliber presentation focus….
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RT @pineurosci: Got one into neuron! LMK if you don't have access, but here's the link and I'll explain why I thin….
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Check out this incredibly impressive preprint by my super talented colleague and friend @kahini_mehta!.
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Exciting opportunity to work in Sweden with my brilliant colleague and friend. Any prospective postdocs interested in clinical memory research and neurodegenerative diseases should DEFINITELY apply!.
‼️Postdoc opportunity‼️ Please RT 🙏. Are you interested in:.* Neurodegenerative disease.* Multi-omic analysis.* Machine learning/AI.* Neuroimaging. Come work with me and the whole BioFINDER team!.Apply here: A quick thread about the position 👇.
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RT @ArielleKeller: Super excited to share our new review article, “Hierarchical functional system development supports executive function”….
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RT @_JakeVogel_: ‼️ Preprint alert ‼️ "Conserved whole-brain spatiomolecular gradients shape adult brain functional organization" https://t….
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Additional thank yous go out to our wildly talented set of co-authors, early adopters, and current users, including our incredible teams at @PennMedicine and @ChildrensPhila, along with @DrDamienFair's @UMNews group and @MilhamMichael's at @childmindinst.
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I would like to give a massive shout out to @sattertt and @CieslakMatt for their mentorship and guidance throughout every stage of this project. Few people are lucky enough to receive one outstanding and brilliant role model during their first job, and I wound up with two.
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The source code for CuBIDS is publicly accessible at #OpenScience.
github.com
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets. - PennLINC/CuBIDS
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The documentation for CuBIDS is available at and our package is available for download on the Python Package Index (@pypi)
pypi.org
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
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CuBIDS also helps users summarize, categorize, and visualize the #metadata heterogeneity present in their #BIDS data, test #pipelines on their dataset's entire parameter space, and perform metadata-based quality control.
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CuBIDS includes a robust implementation of BIDS validation that scales to large samples and incorporates .@datalad––a version control software package for data––to ensure #reproducibility and provenance tracking throughout the CuBIDS curation workflow.
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CuBIDS is a #neuroinformatics workflow and #OpenSource, #Python-based software package designed to facilitate #reproducible curation of neuroimaging data.
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