Simon F. Nørrelykke
@SimonFlyvbjerg
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BioImage analysis and teaching @harvardmed | Previously @ETH, @Princeton, MPI-PKS, @UniofOxford, @uni_copenhagen a.o. |
Boston, MA, USA
Joined July 2017
RT @HMS_IAC: Day 1 & 2 of #bobiac2025 🐍. With basics of Python in the bag, it was time to analyze images: image handling, pre-processing, c….
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First day of #bobiac2025. Six days of intensive Python based #BioImageAnalysis. Intro by @FedeGasparoli - "This will be a long week, but it will change your life".
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RT @DrAnneCarpenter: Broad's Machine Learning in Drug Discovery Symposium coming soon! Nov 7, 2025. Another great lineup. In person (Camb….
broadinstitute.org
Speakers at the 2025 Machine Learning in Drug Discovery Symposium: Tom Miller Iambic Therapeutics Ava Amini Microsoft Research Project Ex Vivo Francesca Grisoni Eindhoven University of Technology...
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RT @BioimagingNA: Happy #MicroscopyMonday! #microscopycommunity- last days to submit your abstract for GBIxBINA 2025! Abstracts are due Jun….
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RT @florianjug: Come and work with us!.Super exciting and relevant projects!.Become an #AI pro and do something positive for the 🌍! 👩🎓….
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RT @HMS_IAC: ‼️3 days left to apply to the Boston Bioimage Analysis Course (BoBiAC)! 💻. Get started w/Python & learn to perform segmentatio….
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RT @focalplane_jcs: Our next Training Grant deadline is 6 June. If you’d like to attend a microscopy or bioimage analysis workshop in the n….
biologists.com
About JCS-FocalPlane Training Grants JCS-FocalPlane Training Grants are aimed at early-career researchers, working in an area covered by JCS, who would like to attend a microscopy training course....
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Great work by group member @iRanitK that should be relevant for anyone wanting to measure how well their segmentation algorithms are performing.
🚨 New paper out: SoftPQ – a robust metric for instance segmentation 🧠📊. Hard IoU thresholds miss the nuance. We propose:.✔️ Soft matching.✔️ Tunable thresholds.✔️ Sublinear penalties.Rovust, interpretable evaluation. 📄 Paper: ⬇️. w/ @SimonFlyvbjerg.
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RT @EPFL_Imaging: 🚨 Job Alert. Like and retweet! The @EPFL_Imaging.Center and the CIME (Interdisciplinary Center for Electron Microscopy)….
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Thanks to generous support from @BioimagingNA we now have even more fee-waivers for our workshop. No funds, but want to learn? Apply below.
💻 Apply to our beginner-friendly Boston Bioimage Analysis Course!. Get started with Python and learn to analyze fluorescence microscopy images—no coding experience required!. Fee waivers available thanks to funding from @BioimagingNA!. 🗓️ Apply June 1st!.
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RT @Fr_BioImaging: [TRAINING] Apply for the new EMBO Course📢. Practical courses on advanced #bioimageanalysis, including image analysis wor….
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RT @HMS_IAC: ‼BREAKING‼.New funding secured for the Boston Bioimage Analysis Course (BoBiAC) this July at @harvardmed. Fees down 37%, with….
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RT @GloBIAS_: GloBIAS #BioimageAnalysis #Conference 2025 – we have opened the registration for our 2025 in-person event. Please check the w….
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RT @emiglietta1: 🚨Workshop Latinoamericano de CellProfiler🚨. El @CiminiLab del @broadinstitute, junto a @COBA_NIH están organizando un Work….
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This summer, we are running a one-week intensive workshop on Python-based BioImage Analysis. Are there better ways to spend 6 days in mid-July in Boston? Probably. Would you learn as much as you will here? Probably not. Apply here:.
Announcing the Boston Bioimage Analysis Course — BoBiAC! Join us this July at @harvardmed in Boston for a 6-day deep dive into bioimage analysis with Python, hosted by @HMS_IAC and @cite_at_hms. Apply by May 16th 2025!
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RT @HMS_IAC: Join us for our first workshops of 2025!. 📌 Image analysis with ImageJ/Fiji.📆 Date: Jan 22 & 24, 2025.🔗 .
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RT @focalplane_jcs: If you would like to attend a #microscopy or #bioimageanalysis training course in the next ~6 months but don’t have fun….
biologists.com
About JCS-FocalPlane Training Grants JCS-FocalPlane Training Grants are aimed at early-career researchers, working in an area covered by JCS, who would like to attend a microscopy training course....
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RT @BioimagingNA: The next Careers Speaker Series presentation is tomorrow, Nov 7 at 12 pm CT, hosted by the Early Career WG!. Join as Davi….
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RT @JenCWaters: I just posted one of the excellent guest lectures from our recent Microtutor LIVE course on my YouTube channel Microcourses….
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RT @HMS_IAC: Eager to learn how to train your own deep learning models for image segmentation? We got you covered! . We are organizing a ne….
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