Seanome
@SeanomeSF
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Non-profit institute building open tools to decode ocean biodiversity's untapped potential
San Francisco, CA
Joined September 2024
Shiny new Seanome website update! Want to know what we do, why the ocean, why we're nonprofit, and about our awesome board of directors and scientific leadership? Go check out https://t.co/vHWIeO07AO!
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At 3, she fled Hitler's invasion by train. By 8, she'd lost her baby sister and mother. Our founder @olgabot shares her grandmother's haunting story of survival in the Soviet Union during WWII. https://t.co/VNBu2H5PeP
blog.seanome.org
Three hundred Rubles separated life from death in Soviet Russia
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Wondering how to win the next #Longevity x #AI #hackathon? Check out our winner breakdown here! https://t.co/INSDySHgwO Hosted by @frontiertower, sponsored by @foresightinst
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What invisible magic 🪄 keeps Biotech running? #Nextflow! Without @nf_core, a global community of pipeline builders, 99% of #genomics research would be stalled by reinventing the wheel. Here's a write-up of the @nextflowio Summit hosted by @SeqeraLabs! https://t.co/TI0RXVUHvc
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Had so much fun running the #Longevity x #AI Hackathon at @frontiertower! Sponsored by @foresightinst Read more: https://t.co/VjpyJOZfBz
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Excited for #Longevity x #AI hackathon on June 14-15 in SF w @frontiertower! We will advance longevity by improving access to siloed datasets of biological aging through HuggingFace. Compete for a $7k prize pool! Sponsor: @foresightinst
https://t.co/CHAN1H8rIf DM with Qs
luma.com
About The Event From June 14-15, Seanome and Frontier Tower are hosting a 2-day hackathon bringing together longevity and AI for the global ML community. No…
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Grateful for the opportunity to share our work!
@olgabot, CEO & Founder at @SeanomeSF, just gave an insightful talk on her vision to create the best protein annotator for any organism using @nf_core, supporting efforts to better understand global biodiversity through large-scale sequencing. 🌍🧬
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Thank you to @StanfordCEHG for inviting me to speak at the Evolgenome Series @Stanford! It was fun to show how hydrophobic‑polar k‑mers unlock “mystery” marine genes that stump InterProScan & AlphaFold/Foldseek. Check out more here ➡️ https://t.co/OI7kVauYIa
#Bioinformatics
blog.seanome.org
Invited talk on decoding marine “mystery genes” with hydrophobic-polar k-mers
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Excited to speak at @NextflowIO Summit! 🎤 “Protein FASTA → ??? → Profit: building the best protein annotator in the world.” I’ll show how @nf_core/proteinannotator blends BLAST, DIAMOND, InterProScan, FoldSeek, Kmerseek + more to map protein function across the tree of life.
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AI in biology is like learning language from Russian math textbooks. We’re training models on one source: humans. But the wildest molecular ideas? They’re in the ocean. At Seanome, we are decoding the forgotten 99%. 🌊🧬 https://t.co/hN5CK2jMO3
#biotech #AI #proteins
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Join @tallphil as he interviews @olgabot, founder & CEO of @SeanomeSF, on today's Nextflow podcast! From @MIT to marine genomics, Olga discusses her experience with @nextflowio and @nf_core communites, and her vision for ocean research 🎧 Tune in:
seqera.io
Seqera | The Home for Open Science | From the developers of Nextflow, Wave, and MultiQC
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The newest OLD tech is #Biodiversity! CEO/Founder @olgabot appeared on "Infinite & Beyond: the MIT Alumni show" discussing the ocean's 43B molecular solutions, listening to your highest self + more! Spotify - https://t.co/hN63xKnU2e YouTube - https://t.co/jfeIFpjLYg
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📝🧬 Like genomes shaped by selective pressures, document systems evolve, too! At #PAG32, our founder @olgabot refined conference talk note-taking from simple bullet points to integrated notes with slides. See more here! https://t.co/ZgXlB9Rqlw
#SciComm #Evolution
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Seanome's first conference #PAG32 is in the books! We dove into #genome annotation, #biodiversity #sequencing, and feeding the world. Our founder + CEO @olgabot presented a talk and poster on annotating proteins of unknown function. Catch the recap here!
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📢 Behind the Scenes: Preparing a talk for #PAG32
https://t.co/ZZtMQFjkWK Latest blog post: A behind-the-scenes look at preparing to speak at a conference, featuring a @NotionHQ template you can use for your next talk! #SciComm #PublicSpeaking
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Super cool work!
In new work led by @aditimerch with @samuelhking, we prompt engineer Evo to perform function-guided protein design with high experimental success rates, including designs that go beyond natural sequences. We also release SynGenome, the first AI-generated genomics database. 🧵 1/N
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🧬 Biodiversity is the foundation of what we do at Seanome 🧬 As scientists, we dance with data to discover its knowledge. As dancers, we embody knowledge to share with others. We are all scientist-dancers, creating new knowledge to share with others. https://t.co/O50G3gIOim
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What can clams teach us about neurodegenerative disease? https://t.co/QRqnqkPzjU
#biodiversity #ocean #genomics
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🌊🧬 Meet Seanome 🌊🧬 We are a non-profit developing open-source genomics tools unlocking the healing power of the ocean. We're starting with the Arctic Clam, whose unknown genes may hold a cure for a rare neurodegenerative disease. Stay tuned! https://t.co/rYUyV2np4a
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