
John Lawson, PhD
@OmicDataScience
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Want to annotate sources of epigenetic variation in your DNA methylation, ATAC-seq, or multi-omics data? Check out the paper on our Bioconductor package, now out in Genome Biology. @shefflab @UVABME @uva_biodatasci @Bioconductor.
COCOA: coordinate covariation analysis for epigenetic heterogeneity, from @OmicDataScience, Sheffield and co. Analyzes covariation of epigenetic data across individuals eg can predict ER status of breast cancer from methylation. Also can use ATAC-seq etc
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Check out our new preprint! A method to annotate epigenetic heterogeneity across samples with biologically meaningful regulatory information. Thanks to the other authors for all their hard work! @shefflab @UVABME @uva_biodatasci.
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