
Nicolas Matentzoglu
@NicoMatentzoglu
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Working @EMBL-EBI for the Monarch Initiative and the Virtual Fly Brain project. All things ontologies, knowledge graphs and wood chopping.
Cambridge
Joined March 2010
With late comers... Up to 88 participants right now ! Congrats @fairimpact_eu It's already an achievement to get such a number of person to discuss #mappings
📣⏰Last chance to register for the @fairimpact_eu virtual workshop "Why Mappings Matter and how to make them FAIR?" 🗓️April 13 14:00 – 18:00 CEST https://t.co/vUvVbq8v70
#MetadataMapping #FAIRdata #FAIRmappings
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#Tislab @MonarchInit is hiring! Assistant Research Professor in #Ontologies & Biocuration and a #Semantic Engineer: https://t.co/zRLfpkP8fU
https://t.co/zRLfpkP8fU
@OBOFoundry @biocurator @OHDSI @data2health @AMIAinformatics
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@hp_ontology @MonarchInit Bridging the language gap - A call for the wider use of Human phenotype ontology by non-geneticist clinicians when requesting genomic tests https://t.co/RQipSHzKkB
pubmed.ncbi.nlm.nih.gov
Advances in genomic technology including the development of next-generation sequencing (NGS) have enabled the identification of thousands of variations at a time, allowing the discovery of novel...
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Vote Dataworks #openData prize! @MonarchInit harmonizes data & #knowledge to help diagnose #rareDiseases; National #Covid Cohort Collaborative #N3C harmonizes #RWD #EHR data. Both are a testement to #dataSharing, #openScience, #womenInStem & #teamScience
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@Tiff_callahan keynote at @iscb Rocky Bioinformatics #knowledgeEngineering for the win! @MonarchInit #ontologies @CUMedicalSchool
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The IMG group of CS Department of UoM @csmcr is going to recruit a new PhD student on Knowledge Graph for Guidance and Explainability in Machine Learning. Contact me or Prof. Uli Sattler. #KnowledgeGraphs #MachineLearning #XAI #ontology #HumanInTheLoop
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I asked the new #gptChat service to write a #SPARQL query using #DBpedia as the data source. To my surprise it worked! #OpenAI #AI #ExplainableAI #Ontology #KnowledgeGraph #LODCloud
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The next keynote speaker of #SWAT4HCLS 2023 Conference will be @chrismungall @LBNLBioSci with the talk Scaling up semantics: lessons learned from across the life sciences👏 Join us 13-16 Feb 2023 #Basel #Switzerland
#CallForPapers until 28 Nov 2022 https://t.co/CaicPq7q2n
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Our manuscript "Unifying the identification of biomedical entities with the Bioregistry" is now published in @ScientificData! https://t.co/z9He4JkmyO
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This whole business of basically teaching ML classifiers DL is.. crazy cool. I don’t understand it yet fully but i am now inspired to give it a proper study.
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The issue of expressivity is really contentious in my community. I think some good points are made by @leechuck that make me want to re-evaluate our radical stance on EL+- or die.
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Just watched @leechuck’s excellent talk in the coevolution of ontologies and knowledge-based analytics in bioinformatics https://t.co/H9BGgiSeQr. I think this is a must-watch for people in ontology engineering (as is all his work). Some minor comments.
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I hope this becomes an example for others as well. Writing papers is not enough, if you want stuff to change, really improve our open resources, you need to reach out, engage, convince. Community work! Too few people take the time for that..
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Amazing “open science spirit” - you run some experiments, detect some issues with the data, prepare a careful presentation about the issues and present them to the original data provider. Thank you @SarahAl33162257 for finding issues in our ontologies and reaching out to tell us!
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See you all at Athens for #iswc2023 #iswc_conf 🙏
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We use the #OntologyDevelopmentKit to build the #terms4FAIRskills ontology and are converting the #SoftwareOntology build (both OBO Foundry ontologies). Great work @NicoMatentzoglu et al! https://t.co/PzUniZFZTr 🥳 https://t.co/6mKjDJswiw
github.com
The Software Ontology (SWO) is a resource for describing software tools, their types, tasks, versions, licences, provenance and associated data. - allysonlister/swo
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Dr Philippe Rocca-Serra has been appointed Senior Director for #FAIRdata Collaborations at AstraZeneca. He will continue his work in our Data Readiness Group on collaborative initiatives to enable data reuse, repurpose & #reproducibility
https://t.co/07IXRHgtnP
@Phil_at_OeRC
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Fellow Independent Consultants, how much unbillable "getting organised" time per day is normal? I am at around 60-90 min and I am wondering if that is.. too much and I should go read my 756th self-help book on time management.
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Use general purpose semantic data models such as @linkml_data and controlled vocabularies/ontologies to describe your data rather than “strings”.
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