
James Manton
@JamesDManton
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Applied physicist & optical microscopist/microscopologist
Joined September 2019
An interesting alternative to iterative deconvolution — just sample from the posterior and average the samples!.
Check out our "Richardson-Lucy without Iteration Cutoffs: Physically Motivated Bayesian Deconvolution". 🔬 bandpass integrated in physics-based fashion to avoid overfitting thru SNR regimes. Fully parallelized code here:.
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RT @jmrko: Interested in working on a state-of-the-art connectomics pipeline at its birthplace as a postdoc? We’d love to hear from you! :)….
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RT @jgreener64: I have two job adverts open at the minute:. - A PhD position on fast MLIPs for biomolecules (. - A….
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RT @nilnorl: Two available postdoc scholarships at Norlin Lab in Lund!.1. Optical Engineering: OPM/light-sheet microscopy and lensless imag….
jobrxiv.org
Post a job in 3min, or find thousands of job offers like this one at jobRxiv!
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A nice use of multispectral microscopy to study the organelle signatures of neurons and astrocytes in 2D+t and 3D! I look forward to playing with the data they've generously made available at
ebi.ac.uk
BioStudies – one package for all the data supporting a study
Preprint alert! Led by Shannon Rhoads, we used 🌈🔬 to elucidate the #organelle signatures of #neurons and #astrocytes at baseline and in response to neurodegenerative-disease associated stressors. See Shannon's awesome tweetorial below!
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Following a poke from @RunningPhoton, I've fixed a bug in my KL divergence calculation function which means our parameter-free deconvolution approach now *really* has no hand-tuned parameters at all:. Feedback always welcome.
We (@AndrewGYork, @RunningPhoton, @microRussell and I) are still working on the manuscript describing our automatic parameter-free deconvolution approach, but we've made a Google Colab notebook where you can try it out without needing to install anything:.
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RT @SuperResoluSian: If you find these kind of incisive scientific discoveries - fluorescence microscopy is not cat photos - interesting th….
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For science, Jacob Lamb, Hugh Wilson and I had a fun morning using a focussed ion beam to image a @Thorlabs CS165MU/M camera. Here's the board loaded into the sample chamber. 1/8
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RT @Zhang_Suyang: Our lab @MRC_LMB is seeking a passionate PhD student to explore transcription-coupled splicing! Join our team for an exci….
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Thanks to @royalsociety and @MRC_LMB, @lab_baum and I are looking for a student to develop the next generation of fluorescent proteins for live and super-resolution imaging, as part of the LMB's four-year PhD programme.
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Congratulations to @_Akaash_Kumar for being awarded the Royal Microscopical Society's Early Career Award for his PhD work on multispectral imaging!.
biorxiv.org
Multispectral imaging is an established method to extend the number of colours usable in fluorescence imaging beyond the typical limit of three or four, but standard approaches are poorly suited to...
Big congrats to Akaash Kumar @_Akaash_Kumar who emerged as our Early Career Award-winner! 👏👏👏🔬🔬🔬. A tough job for our judges after such a brilliant range of talks from our shortlisted speakers. #microscopy #EarlyCareer
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