David Vallenet Profile
David Vallenet

@vallenet

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Researcher at LABGeM, Genoscope @GenoLabgem in bioinformatics, genomics, metabolic networks

Evry, France
Joined April 2009
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@vallenet
David Vallenet
2 months
RT @GenoUMR_GM: 📢 #Joboffer ! Search experienced candidates in bioinformatics/computational biology for a #CNRS Tenure-Track position (Jun….
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@vallenet
David Vallenet
6 months
RT @benagen3571: a novel tool! Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat. #nanopore #haplotype.h….
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@vallenet
David Vallenet
6 months
RT @rrwick: New year, new assemblies!.I'm excited to announce Autocycler, my new tool for consensus assembly of long-read bacterial genomes….
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@vallenet
David Vallenet
7 months
RT @strnr: Keeping it in the family: using protein family templates to rescue low confidence AlphaFold2 models 🧬🖥️🧪….
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David Vallenet
7 months
RT @biorxiv_bioinfo: Decoding substrate specificity determining factors in glycosyltransferase-B enzymes - Insights from machine learning m….
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@vallenet
David Vallenet
8 months
RT @strnr: Efficient generation of protein pockets with PocketGen 🧬🖥️🧪 .
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@vallenet
David Vallenet
8 months
RT @strnr: A gentle introduction to pangenomics
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@vallenet
David Vallenet
8 months
RT @jcamthrash: PanTax: Strain-level taxonomic classification of metagenomic data using pangenome graphs
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@vallenet
David Vallenet
8 months
RT @jcamthrash: Microbial solutions must be deployed against climate catastrophe
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@vallenet
David Vallenet
8 months
RT @NatComputSci: 🚨Guillaume Brysbaert and colleagues introduce MassiveFold, an optimized and customizable version of AlphaFold that runs p….
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@vallenet
David Vallenet
8 months
RT @jcamthrash: mOTUs online database provides web-accessible genomic context to taxonomic profiling of microbial communities https://t.co/….
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@vallenet
David Vallenet
8 months
RT @jcamthrash: A new selective force driving metabolic gene clustering
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David Vallenet
9 months
RT @NatureProtocols: #FeaturedProtocol this week: Learn how to predict structures of monomers, complexes, and alternative conformations wit….
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@vallenet
David Vallenet
9 months
RT @GUILLAUMEGAUTRE: Excellent method—simple, fast, and acurate!. With acknowledgment to @fplazaonate from the authors. @MgpsLab.
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@vallenet
David Vallenet
9 months
RT @Rosy_Zh: Spacedust: de novo discovery of conserved gene clusters. Combining sensitive Foldseek structure search and conserved neighborh….
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@vallenet
David Vallenet
9 months
RT @biorxiv_bioinfo: E(Q)AGNN-PPIS: Attention Enhanced Equivariant Graph Neural Network for Protein-Protein Interaction Site Prediction ht….
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@vallenet
David Vallenet
9 months
RT @biorxiv_bioinfo: ProteinAligner: A Multi-modal Pretraining Framework for Protein Foundation Models #biorxiv_bi….
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@vallenet
David Vallenet
9 months
RT @biorxiv_bioinfo: Enhanced prediction of protein functional identity through the integration of sequence and structural features https:….
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@vallenet
David Vallenet
9 months
RT @BanfieldLab: 🚨 We discovered a new genetic code, "Genetic Code 34," sporadically distributed in archaea. Select archaea have genome-wid….
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