Transcriptomes
@transcriptomes
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Transcriptome feed using #Rstats by @davetang31. Updates made each day 16:00 EST. Image from https://t.co/V4zET1jchu
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Joined January 2015
Protocol for integrated analysis of bacterial RNA-seq and ChIP-seq data for establishing a co...
pubmed.ncbi.nlm.nih.gov
Transcriptomic data and ChIP-seq data from bacteria are systematically analyzed and efficiently combined. We describe the software environment for analysis and the download and installation methods....
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Developmental and genetic basis of the androgynophore in Gynandropsis gynandra.
pubmed.ncbi.nlm.nih.gov
Our morphological characterizations and high-quality transcriptome for G. gynandra suggest that the androgynophore is a novel structure formed via elaboration of both the receptacle and base of...
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Transcriptome profile analysis of Indian mustard (Brassica juncea L.) during seed germination...
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Transcriptomic evidence indicates that montane leaf beetles prioritize digestion and reproduc...
pubmed.ncbi.nlm.nih.gov
During winter, many organisms conserve resources by entering dormancy, suppressing metabolism and biosynthesis. The transition out of winter dormancy to summer activity requires a quick reversal of...
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Acrylonitrile butadiene styrene microplastics aggravate the threat of decabromodiphenyl ethan...
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Polystyrene microplastics trigger adiposity in mice by remodeling gut microbiota and boosting...
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Non-invasive preeclampsia prediction using plasma cell-free RNA signatures.
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Screening core genes and signaling pathways after SFTSV infection by integrated transcriptome...
pubmed.ncbi.nlm.nih.gov
A newly discovered tick-borne virus called the severe fever with thrombocytopenia syndrome virus (SFTSV) can cause the severe fever with thrombocytopenia syndrome (SFTS). The mortality and incidence...
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Case-control virtual histology elucidates cell types associated with cortical thickness diffe...
pubmed.ncbi.nlm.nih.gov
Many neuropsychiatric disorders are characterised by altered cortical thickness, but the cell types underlying these changes remain largely unknown. Virtual histology (VH) approaches map regional...
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Methylome and transcriptome data integration reveals aberrantly regulated genes in equine sar...
pubmed.ncbi.nlm.nih.gov
DNA methylation is a key mechanism in transcription regulation, and aberrant methylation is a common and important mechanism in tumor initiation, maintenance, and progression. To find genes that are...
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Comparative transcriptome analysis of Veratrum maackii and Veratrum nigrum reveals multiple c...
pubmed.ncbi.nlm.nih.gov
Veratrum (Melanthiaceae; Liliales) is a genus of perennial herbs known for the production of unique bioactive steroidal alkaloids. However, the biosynthesis of these compounds is incompletely...
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Deciphering dynamic changes of the aging transcriptome with COVID-19 progression and convales...
pubmed.ncbi.nlm.nih.gov
Deciphering dynamic changes of the aging transcriptome with COVID-19 progression and convalescence in the human blood
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Single-Cell RNA Sequencing and Spatial Transcriptomics Reveal Pathogenesis of Meningeal Lymph...
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Inhibiting Osteolytic Breast Cancer Bone Metastasis by Bone-Targeted Nanoagent via Remodeling...
pubmed.ncbi.nlm.nih.gov
Bone is one of the prone metastatic sites of patients with advanced breast cancer. The "vicious cycle" between osteoclasts and breast cancer cells plays an essential role in osteolytic bone metasta...
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Epitranscriptomic profiling of N4-acetylcytidine-related RNA acetylation in the spinal dorsal...
pubmed.ncbi.nlm.nih.gov
Recently, epigenetics involved in the regulation of gene expression has become a research hotspot. This study evaluated N4-acetylcytidine (ac4c) RNA acetylation in the spinal dorsal horn (SDH) of...
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Transcriptome profiling reveals the expression and regulation of genes associated with Fusari...
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Scaling the invisible wall: Molecular acclimation of a salinity-tolerant diatom to freshwater...
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Multiple paths of plant host toxicity are associated with the fungal toxin cercosporin.
pubmed.ncbi.nlm.nih.gov
The Cercospora species of fungi are responsible for leaf spot disease affecting many key economic crops. Most of these fungi secrete a toxic photodynamic molecule, cercosporin, that reacts with light...
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Hydrogen peroxide regulates the Osa-miR156-OsSPL2/OsTIFY11b module in rice.
pubmed.ncbi.nlm.nih.gov
Field-grown rice (Oryza sativa L.), when exposed to various environmental stresses, produces high amounts of reactive oxygen species, such as H2 O2 . MicroRNAs (miRNAs) play crucial roles in plant...
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Identification and validation of core genes in tumor-educated platelets for human gastrointes...
pubmed.ncbi.nlm.nih.gov
Gastrointestinal (GI) tumors have increasing incidence worldwide with their underlying mechanisms still not being fully understood. The use of tumor-educated platelets (TEPs) in liquid biopsy is a...
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