📰Introducing subseq Blog! https://t.co/3TcdscZYI0 First blog post: Intro to GROMACS for Protein Design https://t.co/C7lifeLdc6

📃New MCP docs:

🔗New: Pre-signed URL's allow for quick sharing of datasets, jobs, or any individual file within them. Anyone with the links can download the data within the expiration window. Available on Web, API, and MCP tools.

c7 symmetric diffusion in action, unconditional backbones. One-shotted with codex using @subseqbio rfdiffusion -> pymol+

A year ago today I launched @subseqbio — a minimal protein design service, offering rfdiffusion and alphafold, pre-configured in a simple UI. Today it's a growing toolkit with many more program types: diffusion (RFdiffusion3, BoltzGen), docking, MD, alignment, seq prediction,

⚡️Subseq MCP Server is now live! ⚡️ Server: https://t.co/t79B8MyzY8 Requires: Authorization: Bearer <SUBSEQ_API_KEY> or set SUBSEQ_API_KEY env var.

✅Update: job logs now show tail of rolling output. Can now view the logs during long job runs. 📜

📡Update: Boltz-2 is now available on subseq This includes both boltz-1 and boltz-2 models. https://t.co/S4i1AyUwXK

🎇RFdiffusion3 is now available on https://t.co/KgJVoTjlGx ! RFdiffusion3 (RFD3) is a diffusion method that can design protein structures under complex constraints.

🎀Holiday Promo: Activated🎀 Until end of year, all new signups on https://t.co/KgJVoTiNQZ will be given $5.00 in free, non-expiring credits! Try out any of the programs offered, enough for hours of runtime, such as BoltzGen, RFdiffusion, Alphafold, and more. #Biotech

⚡️Update: DiffDock-PP has been added! DiffDock-PP is a diffusion-based tool for protein-protein docking: given two protein structures, it translates and rotates them into ranked likely bound complexes. https://t.co/UVauJeKNtH

🚨Update! * FreeBindCraft now available on https://t.co/KgJVoTjlGx https://t.co/8jaWlDs8uK FreeBindCraft is a fully open-source re-implementation of the BindCraft binder-design pipeline that replaces the PyRosetta scoring step with GPU-accelerated open tools.

🚨Update! - DiffDock is now available on subseq. DiffDock is a generative diffusion model for fast, accurate protein–ligand docking with confidence scores. https://t.co/QmbC5spJkm

Can now specify a runtime deadline for new jobs.

Update: OpenMM - molecular dynamics library is now available on subseq https://t.co/NfB4VLmBep

You can now submit custom python directly inline on the new job UI. (no need to save a file first)

🚨Update: BoltzGen is now live on subseq! BoltzGen is an all-atom generative model that designs proteins, peptides, and nanobodies for your targets – in one unified model.

⚡️Update! -- Pymol+ is live on https://t.co/KgJVoTjlGx Now you can create batch images and animations, including rotations, and trajectory, as well as collages of each, from input molecular files. Customize resolution, colors, angles, collage dimensions, and more.

⚡Update: GROMACS is live on https://t.co/KgJVoTjlGx GROMACS is a high-performance molecular dynamics (MD) engine for simulating the motion of atoms— like proteins. On subseq you can configure, run, and download MD results on demand https://t.co/2GiM4KPSUw #biotech

🚨Update: A new lightweight 'Utility' program now available: allows you to upload custom python scripts to execute server side on your bio data. This opens the ability for customized end-to-end biotech computing pipelines. 💾➡️🧬➡️🥩