Sarthak R. Mishra
@smishra677
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PhD student at Hahn Lab IUB. --working on developing algorithms for problems in phylogenetic and population genetics Interest includes #MUFC
Indiana, USA
Joined May 2022
Two years ago: unthinkable that AI could solve a single IMO problem. Last year: DeepMind’s AlphaProof(+ AlphaGeometry) get silver This year: Everybody’s getting gold Next year: the IMO is no longer a useful benchmark for AI systems, and they leave the kids alone; it’s back to
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In #GENETICS, @3rdreviewer and @smishra677 show it is possible to estimate recombination solely using the allele frequency spectrum and provide a genealogical interpretation of the results, showing how #MachineLearning can offer insights into biology. https://t.co/t74hUHP6vm
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Here is the published version of our paper (w/@smishra677) in Genetics: https://t.co/vQiygp9HSK
academic.oup.com
Abstract. Standard methods for estimating the population recombination parameter, ρ, are dependent on sampling individual genotypes and calculating various
Here is a video of my talk for those interested: https://t.co/HJUjbROtAG
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New paper led by @suggestive_pval ! "Unprecedented female female bias in the aye-aye, a highly unusual lemur from Madagascar" 1/ https://t.co/L3pULsbYpp...
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New paper with @smishra677 ! Maybe it will bring you some joy given all this (waves arms around). "Estimating recombination using only the allele frequency spectrum" 1/2 https://t.co/ruD4S8xog2
biorxiv.org
Standard methods for estimating the population recombination parameter, ρ , are dependent on sampling individual genotypes and calculating various types of disequilibria. However, recent machine...
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Kevin Buzzard (number theoretist & math formalization pioneer, e.g. formalizing perfectoid space, towards formalize Fermat) wrote a great blog post on @OpenAI o3' ability on FrontierMath: https://t.co/laYu9HhE5X
xenaproject.wordpress.com
So the big news this week is that o3, OpenAI’s new language model, got 25% on FrontierMath. Let’s start by explaining what this means.
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I drew this planktonic worm with mathematical equations.
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Updated version of reconcILS, now with more results and more speed (same great accuracy!) 1/ https://t.co/9TEwksmoI5
biorxiv.org
Reconciliation algorithms provide an accounting of the evolutionary history of individual gene trees given a species tree. Many reconciliation algorithms consider only duplication and loss events...
ONE new preprint (led by @Sarthak_mista and @snaild_it), TWO new programs (reconcILS and dupcoal). Check it out: https://t.co/qRAEybtdo4
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ONE new preprint (led by @Sarthak_mista and @snaild_it), TWO new programs (reconcILS and dupcoal). Check it out: https://t.co/qRAEybtdo4
biorxiv.org
Reconciliation algorithms provide an accounting of the evolutionary history of individual gene trees given a species tree. Many reconciliation algorithms consider only duplication and loss events...
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A few interesting books I have gone over in the past 5 years.
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