
MS-DIAL
@msdial_project
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MS-DIAL was launched as a universal program for untargeted metabolomics that supports multiple instruments (GC/MS, GC/MS/MS, LC/MS, and LC/MS/MS) and MS vendors
Joined August 2022
#MSDIAL5 is currently under intensive development 👨💻 It will cover #metabolomics #lipidomics #proteomics including all new types of fragmentation mechanisms .💥 such as EAD or OAD and much more! What do you think the new MSDIAL should contain? Are you missing any functionalities?
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We are excited to introduce a novel MS2 data processing workflow that extends the capabilities of metabolomics and lipidomics through ZT Scan DIA 2.0. Details are now available in our preprint:.🔗 #metabolomics #lipidomics #massspectrometry #msdial.
biorxiv.org
Herein, we present a scanning data-independent acquisition (DIA) approach (ZT Scan DIA 2.0) combined with dual-dimensional tandem mass spectrometry spectral deconvolution along both the quadrupole...
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🌐 Explore our lab's research: Special thanks to @czi and @ss_f_official!!!!.
systemsomicslab.github.io
## Build Setup
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🌟 Exciting Postdoctoral Fellowship Opportunity! 🌍🔬.We are thrilled to announce that the Hiroshi Tsugawa Lab is proud to serve as a host lab for the prestigious CZ Biohub Global Science Scholars Program! Pls circulate!.
czbiohub.org
Apply for the new international postdoctoral fellowship program from the CZ Biohub Network and Stellar Science Foundation.
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Here is the preprint of our latest research using SWATH-DIA-EAD-MS/MS for FAHFA profiling.
biorxiv.org
Fatty acid esters of hydroxy fatty acid (FAHFAs) are a biologically important class of lipids known for their anti-inflammatory and anti-diabetic effects in animals. The physiological activity of...
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The official paper of MS-DIAL 5 is now available online. We appreciate your feedback to make the MS-DIAL project for metabolomics/lipidomics data management more shiny!
nature.com
Nature Communications - Lipids are complex molecules crucial for life. The authors developed MS-DIAL 5, a tool that enhances in-depth structure elucidations and the spatial mapping of lipidome....
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Here is our latest preprint showing MS-DIAL 5 environment to illuminate lipidome complexities with multimodal mass spectrometry data.
biorxiv.org
Lipidomics and metabolomics communities comprise various informatics tools; however, software programs that can handle multimodal mass spectrometry (MS) data with structural annotations guided by the...
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We uploaded the latest version of ms-dial5/msfinder at the riken prime webpage. See the detail at
github.com
Universal workbench incorporating msdial, msfinder, and mrmprobs - systemsomicslab/MsdialWorkbench
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RT @GoogleOSS: 🥁 Drumroll please! 🥁. We're thrilled to announce the Contributors for Google Summer of Code 2023 👉 .
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We have published our Google Summer of Code proposal template and encourage you to start filling it out.
github.com
Hi potential GSoC contributors, We created a proposal template for https://summerofcode.withgoogle.com/programs/2023/organizations/mzmine-and-ms-dial . See https://docs.google.com/document/d/1iJ4zh...
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We have posted a video on to help you build your own MS-DIAL5,4, and MS-FINDER. This would be especially helpful to those interested in contributing to our Google Summer of Code project.
summerofcode.withgoogle.com
Google Summer of Code is a global program focused on bringing more developers into open source software development.
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MZmine (@mzmine_project) and we have added a link to GitHub Discussions for our Google Summer of Code ideas to (It is under section "Project ideas"). If you prefer open discussion, please feel free to comment the ideas in .
github.com
Explore the GitHub Discussions forum for MZmine-MS-DIAL-GSoC MZmine-MS-DIAL-GSoC.github.io. Discuss code, ask questions & collaborate with the developer community.
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MS-DIAL and @mzmine_project will participate in #GSOC 2023!.If you have some experience with #massspec and if you like #coding to solve problems in #massspec #metabolomics #lipidomics is your thing: read
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MS-DIAL team uploaded the latest version of ms-dial 5 (5.1.230222). Also, our team put the source code on the github by the help of @kozo2 Kozo Nishida and Yuki Matsuzawa!
github.com
Universal workbench incorporating msdial, msfinder, and mrmprobs - systemsomicslab/MsdialWorkbench
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As a tutorial of ms-dial 5, we prepare youtube videos here. This does not contain the tutorial of all functions yet. Please let us know what you need in the tutorial, and we will prepare it asap!
youtube.com
Videos from Tsugawa lab : Department of Systems Biology - Tokyo University of Agriculture and Technology (TUAT) in Japan. - https://web.tuat.ac.jp/~tsugawalab/index.html - http://prime.psc.riken.jp...
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In addition, we would like to announce our latest preprint showing a lipidome landscape of aging in mice where MS-DIAL 4 series (having enhanced lipidomics database) was used.
researchsquare.com
Understanding the molecular mechanisms associated with aging is important to improve the longevity of healthy individuals. Herein, we performed untargeted lipidomics to elucidate the relationship...
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