midstlab Profile
midstlab

@midstlab

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Multiscale Interactions and Dynamical Systems Theme Lab @sabanciu @alirana_atilgan @cananatlgn

Joined November 2018
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@midstlab
midstlab
7 months
Our manuscript on 'Ranking Single Fluorescent Protein-Based Calcium Biosensor Performance by Molecular Dynamics Simulations' was the #HighlightOfTheWeek. We love this work by @mberksoz and @cananatlgn - Watch out for more of our exciting findings on nanobiosensor design!.
@JCIM_JCTC
JCIM & JCTC Journals
7 months
#HighlightOfTheWeek Transition from holo to apo conformation in a calmodulin-based calcium biosensor, GCaMP2. #compchem.
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@grok
Grok
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What do you want to know?.
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@midstlab
midstlab
8 months
RT @erogludnz: Sonuncusu 2019’da gerçekleşen İstatistiksel Fizik Günleri (İFG), 27. IFG toplantısı ile geri dönüyor! . 3-5 Temmuz 2025, Ka….
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@midstlab
midstlab
8 months
One more of us moves on to the next level. @Busratyhn had a terrific master's thesis defence having a most stimulating discussion with our jury @TastanOznur Umut Şahin, Nihan Çelebi and co-advisors @cananatlgn & Ali Rana Atilgan. Great day outside offering the perfect final shot:
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@midstlab
midstlab
9 months
Our group meeting this week:
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@midstlab
midstlab
10 months
RT @EMBO: European funders and organizations partner to promote sustainable research. Read more about the Heidelberg Agreement:. https://t.c….
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embo.org
The Heidelberg Agreement on Environmental Sustainability in Research Funding is endorsed by EMBO and multiple stakeholders
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@midstlab
midstlab
10 months
RT @BioExcelCoE: Canan Atilgan (@cananatlgn) presented the computational work done in her group to design fluorescent biosensors https://t.….
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@midstlab
midstlab
10 months
RT @EMBO: #Funding for #lifescientists in #Türkiye: join the info webinar on 24 October 13:30 EET hosted by @Tubitak .Register at https://t….
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@midstlab
midstlab
10 months
RT @BilimAkademisi: Bilim Akademisi üyesi Daron Acemoglu 2024 Nobel İktisat Ödülünü aldı!. “Kurumların oluşumu ve refaha etkilerine” ilişki….
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@midstlab
midstlab
10 months
RT @Busratyhn: Just wrapped up an amazing workshop, 'MIDST of Computational Design of Fluorescent Biosensors'! 🌟 Learned so much about gene….
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@midstlab
midstlab
11 months
RT @cananatlgn: Bir araştırmacıyı onyıllarca izliyor, takdir ediyor, üstelik ne yaptığını gerçekten anlıyorsun. 😅 Sonra Nobel alınca ayrı b….
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@midstlab
midstlab
11 months
RT @isikantarcioglu: TolC, a crucial outer membrane protein, plays a major role in antibiotic resistance by acting as a channel for efflux….
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@midstlab
midstlab
11 months
RT @BilimAkademisi: Bilim Akademisi Deprem Koordinasyon Komitesi rehberliğinde hazırlanan "Bilim Akademisi Deprem Tartışmaları: Çok Daha İy….
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@midstlab
midstlab
1 year
RT @IvetBahar: Dear Colleagues,.We are recruiting an endowed assistant professor at the Laufer Center for Physical and Quantitative Biology….
laufercenter.org
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@midstlab
midstlab
1 year
RT @Busratyhn: So excited to share our latest preprint! It's also my first article! 🥳 🎉.
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@midstlab
midstlab
1 year
RT @mugugaipen: on @IT4Innovations Karolina cluster. Our adaptable pipeline offers a valuable tool for computational biology, providing dee….
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@midstlab
midstlab
1 year
RT @JPhysChem: This MuMi scheme explains the single mutational landscape of GB1 IgG-Fc binding by focusing on dominant intermolecular hydro….
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pubs.acs.org
Mutational changes that affect the binding of the C2 fragment of Streptococcal protein G (GB1) to the Fc domain of human IgG (IgG-Fc) have been extensively studied using deep mutational scanning...
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@midstlab
midstlab
1 year
Our new paper featuring “apple of our eye” method MuMi to rationalize deep mutational scanning experimental results, explained by our first-time corresponding author lab member @mugugaipen:.
@mugugaipen
Furkan
1 year
Our paper titled "Deciphering GB1’s Single Mutational Landscape: Insights from MuMi Analysis" is published in @JPhysChem! In this paper, we first delve into molecular dynamics simulations of the wild-type GB1-IgG-Fc complex.
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