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Kumar Lab, UC Berkeley Profile
Kumar Lab, UC Berkeley

@kumarlabucb

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Lab of Prof. Sanjay Kumar, @QB3Berkeley Director. Dissecting, modeling, and controlling biology with materials & mechanics Also at https://t.co/Vev0PQ7CMl

Berkeley, CA
Joined March 2017
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
New paper in Advanced Materials! We develop a family of 3D viscoelastic HA matrices and use them to study effects of stress relaxation on GBM invasion. Led by @EmilyCarvalhoGQ in collaboration with Andreas Stahl and @ManishKAghi
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advanced.onlinelibrary.wiley.com
Glioblastoma spheroids invade faster in stress-relaxing, high-molecular-weight (HMW) hyaluronic acid hydrogels than in more elastic-like, low-molecular-weight counterparts. The long HMW chains...
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
Experimental studies were led by Erika Ding, with Takashi Yokokura conducting very valuable SCFT modeling under Prof. Rui Wang's guidance. Erika and Takashi are incredibly talented and motivated . if you see one or both in a future faculty search, give them a close look!
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
This may explain why M makes such important functional contributions in mouse genetic models, and why H is so thoroughly phosphorylated (another longstanding mystery) – though studies with M and H mutants reveal a much more complex picture. See the paper for details!.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
Conversely, H's charges are much more mixed, yielding a condensed structure. However, H does swell and approach the brush periphery when H is charged via multi-site phosphorylation at its KSP repeats – just as it is typically found in the axon.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
Very briefly, we show that despite M's smaller size, it populates the outer reaches of the brush at physiol ionic strength bc of its relatively segregated charge distribution. As a result M behaves like a polyelectrolyte, with charge repulsion driving chain expansion.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
Since AFM can only measure an aggregate brush height, the expts were also closely coupled to (and guided by) SCFT-based modeling to gain insight into internal brush structure.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
We sought to gain insight into this longstanding paradox by preparing recomb L, M, and H, assembling them as mixed-subunit "brushes" on surfaces, and characterizing these brushes w AFM and related surface techniques.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
Paradoxically, even though H is much longer than M and should thus presumably play a dominant role in NF network assembly, pioneering mouse genetics studies from the 2000s implicates M much more strongly in governing axonal caliber and radial growth. How can this be?.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
NFs are IFs composed of 3 subunits (light, med, heavy) that co-assemble into bottlebrush-like structures. The C terminal IDRs of M and H form the "bristles" of the brush and are presumed to mediate interactions between adjacent NFs.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
For those who mostly know us for biomaterials and mechanobiology, this is part of a 20+y thread of work aimed at understanding how NFs assemble into 3D networks that contribute to and protect axonal caliber.
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@kumarlabucb
Kumar Lab, UC Berkeley
8 months
Excited to share our new paper in @PNASNews on mixed, reconstituted neurofilaments (NFs). This work was led by ChemE PhD student Erika Ding and done in collab w Prof. Rui Wang and ChemE PhD student Takashi Yokokura here at Berkeley
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
Wait, how did @profmikeking manage to like this post 12 times.
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
What a pleasure to visit the iconic @NotreDame to give this seminar! Exciting to hear about the push to build in Bioengineering & Life Sciences, including some brilliant recent faculty recruitments and new lab space. Many thanks to @DHPGroup and colleagues ☘️.
@DHPGroup
Donny Hanjaya-Putra
9 months
Great to have Dr. Sanjay Kumar @kumarlabucb from @BerkeleyBioE @QB3 @Cal_Engineer for our @AeroMechND @NDBioeng seminar. Learning a lot about the elements of time and biomechanics in tumor and stem cell biology! .
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
Now up and running at for those interested in following us over there!.
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
Paper also includes AFM measurements of both normal and tumor-laden brain to help guide material design. Congrats to @EmilyCarvalhoGQ and other authors!.
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
We show that VE matrices support a special leader-follower mode of invasion in which leader cells use hyaluronidases to pave paths, with followers then exploit. Invasive morphologies closely resemble those previousy seen by intravital imaging
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
Thoroughly enjoyed the event! Thanks to the organizers for the invitation. Great things in store for @BUmechanobio.
@BUmechanobio
CMTM, Boston University
9 months
Up next: Dr. Sanjay Kumar @kumarlabucb from @QB3Berkeley presenting “Tales from the fourth dimension: Incorporating the element of time into biomaterial paradigms.”. #mechanobiology #annualsymposium @BUCollegeofENG @BU_Tweets
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@kumarlabucb
Kumar Lab, UC Berkeley
9 months
RT @BUmechanobio: Up next: Dr. Sanjay Kumar @kumarlabucb from @QB3Berkeley presenting “Tales from the fourth dimension: Incorporating the e….
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@kumarlabucb
Kumar Lab, UC Berkeley
10 months
RT @QB3Berkeley: We're back with our faculty focus interview series! First up: Leah Guthrie, a @BerkeleyBioE faculty member & @QB3 faculty….
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@kumarlabucb
Kumar Lab, UC Berkeley
11 months
Work done as part of our ongoing, exciting collab w @ManishKAghi. Congrats @junghwacha and team!.
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