Iain Clark
@icclarker
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Assistant Professor UC Berkeley | microfluidics | hiv latency | neurologic diseases | conflicts: fluent biosciences
Berkeley, CA
Joined June 2020
New(ish) preprint from the lab: https://t.co/HN1ofmzSQF ! Led by the talented Cyrille Delley, we applied single-cell DNA+Ab-seq (DAb-seq) to study HIV persistence in CD4 T cells. All devices and reagents are open-source!
biorxiv.org
In individuals on effective antiretroviral therapy, integrated HIV proviruses persist within CD4 T cells, forming a viral reservoir that rebounds if treatment is stopped. Identifying and targeting...
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after sharing the news with family and friends, i am thrilled to announce that i have been promoted to Professor of Biomedical Engineering and Quantitative and Computational Biology @USC !! @USCViterbi @uscbme @qcb_usc
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For next week's #PennBioengineering seminar, @timothy_lamont will speak on "Synthetic Genome Regulation for Cell and Tissue Engineering”. Bio & abstract: https://t.co/VC0PObUs2j
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Congrats Jason!!!
I’m so honored and grateful to be named a MacArthur Fellow! I’ve been absolutely flooded with texts, emails and likes. What a wonderful experience to hear from colleagues, collaborators, friends, and family. Thank you all for the support and encouragement!
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Thrilled and humbled to be part of this amazing group!
Welcome to our Innovation Investigators! Zhenan Bao @zhenanbao, Iain Clark @icclarker, Nathanael Gray, William Greenleaf @WJGreenleaf, Brian Hie @BrianHie, Isha Jain @ishahjain, Anna Molofsky @AnnaMolofskyLab, Alanna Schepartz @AlannaSchepartz, Jimmie Ye @yimmieg
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We are excited to see who's Next! @QB3Berkeley @BerkeleyBioE @berkeleyMCB @BerkeleyMetBio @UCB_Biophysics
Are you a postdoc/grad student preparing to launch a faculty search? Have you worked to increase equity & inclusion in STEM? Apply to the 2023 Next Generation Faculty Symposium ( https://t.co/l8ecND7zSl)! RT widely! (1/4) @CZBiohub @Stanford_ChEMH @StanfordBioE @StanfordBioX
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Just out in @LancetMicrobe! is community level WASH associated with the global burden of AMR? Fantastic team collaboration, leveraging metagenomes from 26 countries + DHS data @envbio @mayanads @colinworby @JoeBrownUNC @klevy_uw
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we did a thing! exciting partnership with @FluentBioScien1 reported by @PRNNonProfit single cell sequencing for the masses - PIPseq is here, and it works in the brain! watch for paper coming soon PRESS:
prnewswire.com
/PRNewswire/ -- Fluent BioSciences, a top life sciences company focusing on bringing the benefits of high-quality single-cell biology to all laboratories by...
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Excited to share our new preprint: CRISPRi-based screens in iAssembloids to elucidate neuron-glia interactions https://t.co/M2RW9BvtZt Project led by @KampmannLab student @EmmyLiTweets, check out her tweetorial here:
biorxiv.org
The sheer complexity of the brain has complicated our ability to understand its cellular mechanisms in health and disease. Genome-wide association studies have uncovered genetic variants associated...
It’s alive on BioRxiv! Super excited to present our paper on CRISPRi-based screens in 3D neuron-astrocyte-microglia co-culture (iAssembloids) to examine neuron-glia interactions. Description of this work in the thread below! Too many words! (1/8) https://t.co/tszpNqFWQJ
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Our free Single Cell Genomics Day workshop starts tomorrow at 10AM EST! You can ask watch the Youtube livestream at https://t.co/zG98gkcSCs. See you soon!
Interested in single cell genomics but need help getting started? Check out the full agenda for our Single Cell Genomics Day next Friday (4/7). All talks will be live-streamed (no registration required) at https://t.co/mkkGb2p91d
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Congratulations Prof Dan Fletcher, winner of the 2023 the Carol D. Soc Distinguished Graduate Student Mentoring Award!
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Incredibly honored by this award for our lab! I'm very grateful to the past and current creative and talented graduate students and postdocs who have driven the work we are being recognized for, as well as to the Society and everyone who took the time to nominate me.
We are thrilled to recognize our 2023 Award Winners: Dr. Arthur Lesk, Dr. Mei Hong, Dr. Patricia Clark, Dr. Polly Fordyce, Dr. Jason Gestwicki, Dr. Renã Robinson, Dr. Kevin Gardner and Dr. Elena Conti. See you in Boston! https://t.co/nL5d1BhBJU
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Join us in person or online for the Distinguished Lecture in Bioengineering: Nancy Allbritton! Wed 3/22 Noon PDT. https://t.co/ISh4U9Nhus
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During COVID the talented @blisssrsb and @envbio developed a virtual module ( https://t.co/UeJfxFBLY9) to teach students about AMR, sequencing, and bioinformatics. read how the module led to student learning gains and increases in STEM identity here!
journals.plos.org
COVID-19 necessitated the rapid transition to online learning, challenging the ability of Science, Technology, Engineering, and Math (STEM) professors to offer laboratory experiences to their...
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@BerkeleyBioE @QB3Berkeley @UCBerkeley @FluentBioScien1 @UCSF_BTS @WhiteheadInst @UCSF @HHMINEWS @czbiohub @icclarker Single-cell sequencing solution seeks to unleash disruptive science, with a vortexer #NBTintheNews via @physorg_com
phys.org
A new single-cell encapsulation, lysis and barcoding method of cDNA is faster and requires less equipment, hardware, expense and expertise. It has been demonstrated to be compatible and scalable with...
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Hoping to majorly scale up some single-cell experiments using this tech!
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SPEAC-ing of fantastic collaborative efforts from @mwheeler0, @icclarker & @hong_lee89, our SPEAC-seq paper is out in @ScienceMagazine today! In short: Microfluidic screening 🤝Discovery of functional cell-cell interactions Microglia🤝Astrocytes
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@mwheeler0 @icclarker @hong_lee89 @ScienceMagazine We got too caught up thinking about SPEAC puns – here is the link to the paper: https://t.co/w9a25W82s8
science.org
A high-throughput platform enables the identification of cell-cell interaction mechanisms in forward genetic screens.
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We've been working on Seurat v5 for two years and are excited to share it with you soon! In a webinar w/@10xGenomics and @ScienceMagazine on 3/29, I'll introduce new methods to analyze spatial/multimodal datasets that scale to tens of millions of cells:
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The next generation of single-cell sequencing methods can be microfluidics-free (but I still love microfluidics). https://t.co/suQWlTyKa8
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