Geert-Jan Huizing
@gjhuizing
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PhD in machine learning and computational biology | Formerly @ens_ulm and @institutpasteur
Paris
Joined July 2020
🎉 New preprint! STORIES learns a differentiation potential from spatial transcriptomics profiled at several time points using Fused Gromov-Wasserstein, an extension of Optimal Transport. @gabrielpeyre @LauCan88
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RT @kiradusterwald: New preprint! 🚨 Clustering is a powerful tool in genomics & neurosci, but is contingent on the distance /cost chosen be….
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RT @Inria_lyon: 🥳Bravo @SibylleMarcotte, membre de l'équipe Ockham de notre centre, doctorante à @ENS_ULM, lauréate 🏆du Prix Jeunes Talents….
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RT @gabrielpeyre: "Transformers are Universal In-context Learners": in this paper, we show that deep transformers with a fixed embedding di….
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RT @jkobject: 🚨🚨 AI in Bio release 🧬 . Very happy to share my work on a Large Cell Model for Gene Network Inference. It is for now just a….
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Inspiration for the 3D visuals came from this paper
Very excited to share our new pre-print: ‘A Single-cell Perturbation Landscape of Colonic Stem Cell Polarisation’ led by @QinXiao1990 and @FerranC96. (1/11)
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RT @PierreAblin: Come check @VCastin_ ´s work on the smoothness of attention 🔥🔥🔥. Happening now, poster 510 !
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RT @JulesSamaran: 🥳 I’m very happy to announce our preprint ! scConfluence combines uncoupled autoencoders with Inv….
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RT @SibylleMarcotte: Happy to be at NeurIPS!.I'll present my work on conservation laws for gradient flows ( tomorro….
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RT @_bunnech: How does optimal transport allow us to study dynamical systems? How does it connect to control theory, flow matching, & diffu….
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RT @SimonCrouzet: 🔬Pleased to share our latest preprint, "G-PLIP: Knowledge graph neural network for structure-free protein-ligand bioactiv….
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RT @m_e_sander: 🥳🥳 New work: Implicit Regularization of ResNets towards Neural ODEs. w. @PierreMari0n, Yu-Han Wu a….
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RT @TastanOznur: Ah, we forgot to tweet this. @gjhuizing from @institutpasteur (@LauCan88 lab) has won the MLCSB best poster award with th….
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RT @gabrielpeyre: I have written a very short mathematical summary of the main ingredients of denoising diffusion models. .
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RT @LauCan88: @gjhuizing from my team @institutpasteur presenting Mowgli @MlcsbC #ISMBECCB2023. If you want to know more about it check the….
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RT @PierreAblin: New paper out : a simple way to have optimal transport with sparse displacements🎆. "Monge, Bregman and Occam: Interpretabl….
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RT @scverse_team: Next Tuesday at 2023-06-27 18:00 CEST will be another community meeting!.@gjhuizing will talk about Mowgli, a method for….
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RT @TrimbourR: How cooperation events in different omics can help to infer molecular mechanisms ? Read our new pre-print ! "Molecular mecha….
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