Animesh Gupta
@anigupta12
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Quantitative biologist @generate_biomed | PhD @UCSanDiego | IITB | Phys, EvoBio | Interests- soccer, tango, economics, geopolitics and philos of science
Cambridge, MA
Joined May 2009
RT @joshuasweitz: Proofs are here. Asymptomatic: The Silent Spread of COVID-19 and the Future of Pandemics . Available for pre-order,….
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RT @skryazhi: 1/7 Terry Hwa and I are looking to hire a joint postdoc at @UCSanDiego. The "official" ad is below 👇 Please repost and spread….
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RT @justinrmeyer: I want to congratulate former student Hannah Strobel and our collaborators for this paper, our first directly studying th….
academic.oup.com
Abstract. When proteins evolve new activity, a concomitant decrease in stability is often observed because the mutations that confer new activity can desta
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RT @justinrmeyer: We're recruiting one or two postdocs to work on subjects at the intersection of basic research on phage-bacterial coevolu….
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RT @generate_biomed: Today we release Chroma, our generative model for protein design, open-source on Github with a Nature publication desc….
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RT @justinrmeyer: Proud of @jm_borin for his recent paper from our lab in collab w/ @joshuasweitz. This work makes the findings from my mos….
biorxiv.org
Interactions between species have catalyzed the evolution of multiscale ecological networks–including both nested and modular elements that regulate the function of diverse communities. One common...
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RT @jm_borin: Chapter 3: You've heard of fecal microbiome transplants, but what about fecal VIROME transplants?.
biorxiv.org
Background The gastrointestinal microbiome plays a significant role in numerous host processes and has an especially large impact on modulating the host metabolism. Prior studies have shown that when...
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RT @justinrmeyer: New paper out by @jm_borin and his mentees on selecting phages for phage therapy. Trained by coevolution, generalists, s….
onlinelibrary.wiley.com
The evolution and spread of antibiotic-resistant bacteria have renewed interest in phage therapy, the use of bacterial viruses (phages) to combat bacterial infections. The delivery of phages in...
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RT @justinrmeyer: Recruiting postdocs to work at the intersection of phage therapy and evolutionary biology. Topics include coevolutionary….
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More coverage of our work - 'Front Matter' at PNAS : ).
Thank you @MayBerenbaum @PNASNews for promoting our research, I just wish you had given our work a 2nd chance when it received mixed reviews at PNAS. Junior researchers, never let a flawed review process get you down!
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My main project from PhD is published! Many thanks to all the coauthors for their support and efforts in seeing this big, long project through to the end. Below is a short summary by my advisor and link to the press release on our work for all curious minds. Check it out :).
New paper out that took >10 years to complete and included an incredible team @anigupta12 @LuisZaman Hannah Strobel @gallie_jenna @AlitaBurmeister @evokerr Einat Tamar @RoyKishony 1/3. @eLife.
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RT @generate_biomed: Breaking news: We've just been named to @Forbes AI 50 List, which recognizes standout companies making the most inter….
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Very excited to share our new work on understanding mechanisms that drive host-parasite coevolution! Thanks to all the co-authors for all their work and inputs. Below is the full-text link and a great summary of the paper by @justinrmeyer
New paper out in Ecology Letters with @anigupta12, @joshuasweitz, @cyleung2001, @jm_borin, and others that provides important lessons on coevolution, cryptic genetic variation, and mechanisms structuring microbial communities. 1/14
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RT @wc_ratcliff: Well, this has been a long-awaited day- the first paper on our multicellularity Long Term Evolution Experiment (LTEE) is o….
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My main PhD work is now up on bioRxiv! Check it out :).
I’m thrilled to publish this preprint; it took a decade worth of work! Congratulations @anigupta12 for pushing the work over the finish line with help from @LuisZaman @evokerr @AlitaBurmeister @RoyKishony and others. 1/7
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RT @justinrmeyer: I’m thrilled to publish this preprint; it took a decade worth of work! Congratulations @anigupta12 for pushing the work o….
biorxiv.org
During the struggle for survival, populations occasionally evolve new functions that give them access to untapped ecological opportunities. Theory suggests that coevolution between species can...
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