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Samarth Mathur Profile
Samarth Mathur

@SamarthPhD

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112

He/him | computational biologist

Joined June 2021
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@SamarthPhD
Samarth Mathur
1 year
Thank you @sse_evolution presidents for honoring my dissertation work with such great recognition. Looking forward to attending the @Evol_mtg in Montreal and celebrating with everyone. đŸ„ł For those who are interested, article link (it’s open access):
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academic.oup.com
Abstract. Small populations are vulnerable to increased genetic load and drift that can lead to reductions in fitness and adaptive potential. By analyzing
@sse_evolution
SSE
1 year
This year’s SSE Presidents’ Award goes to Dr. Samarth Mathur for his paper, “An evolutionary perspective on genetic load in small, isolated populations as informed by whole genome resequencing and forward-time simulations.” https://t.co/8M88v9zIWe @SamarthPhD @journal_evo
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@SamarthPhD
Samarth Mathur
4 months
Excited to share this press article highlighting our recent paper. We looked at the benefits and risks of genetic rescue & developed new metrics to quantify genomic compatibility—to evaluate potential benefits and risks of rescue efforts https://t.co/u8zXr75KNt
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news.osu.edu
The established conservation practice of relocating animals from large, genetically diverse populations to small communities of inbred endangered species may risk introducing more damaging than...
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@SamarthPhD
Samarth Mathur
5 months
Can we safely use assisted gene flow to rescue endangered species without making things worse? 🧬 Our new study in @molecology use newly devised metrics to explore genomic compatibility in Massasauga rattlesnakes, showing the trade-offs of genetic rescue. https://t.co/EDEI0biMCD
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@SamarthPhD
Samarth Mathur
10 months
Thanks Texas Chapter of the @wildlifesociety for this incredible honor. Congratulations to all the coauthors. #TCTWS https://t.co/dvBvSXIEvr
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academic.oup.com
Abstract. Small populations are vulnerable to increased genetic load and drift that can lead to reductions in fitness and adaptive potential. By analyzing
@AndrewDeWoody
J. Andrew DeWoody
10 months
Congrats to Drs. Mathur, Tomeček, Tarango-Arámbula & Perez; our genetic load paper recently won the Outstanding Scientific Publication Award from the Texas Chapter of The Wildlife Society (its 2nd best paper award) :) @sse_evolution @SamarthPhD https://t.co/5JbbzXyJza
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@AndrewDeWoody
J. Andrew DeWoody
1 year
#Evol2024 was fun (and educational, too!) @SamarthPhD @AndrewMularo
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@SamarthPhD
Samarth Mathur
1 year
Super excited to see our Montezuma Quail cover on the Evolution and Evolution Letters banner at #Evol2024. Thank you Melinda and @sse_evolution for printing these cute quail stickers. Anyone and everyone who picked up these stickers at the booth, thank you too!! #evolution2024
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@AndrewDeWoody
J. Andrew DeWoody
1 year
Current and former lab members/affiliates at #Evol2024, we’re planning an informal lab social on Sunday evening; please feel free to join us! Details TBD but likely ~6-9ish somewhere with food and drinks @AndrewMularo @SamarthPhD
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@SamarthPhD
Samarth Mathur
2 years
Earlier this month, I was invited back to Purdue by @PU_OIGP to give the Closing Keynote Seminar at the 2024 Spring Reception where I discussed my research and journey in the fields of computational biology, genomics, and cancer. More information here: https://t.co/6b3MRxtJci
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@AndrewDeWoody
J. Andrew DeWoody
2 years
Congratulations to former PhD student Dr. Samarth Mathur! Samarth won the Outstanding Dissertation Paper award from the Society for the Study of Evolution for his 2023 paper in Evolution. Great job, Samarth! https://t.co/5JbbzXyJza
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academic.oup.com
Abstract. Small populations are vulnerable to increased genetic load and drift that can lead to reductions in fitness and adaptive potential. By analyzing
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@SamarthPhD
Samarth Mathur
2 years
Glad to be a part of this study published today in #BMCEcoEvo @BMC_series examining the evolutionary history of Speckled Dace, a fascinating and unique desert fish, using genomics and bioinformatics. Congratulations to all the coauthors!
@BrianSidlauskas
Brian Sidlauskas
2 years
New open access paper from my lab about Oregon’s endemic Foskett Spring Speckled Dace. Genetic approaches reveal a healthy population and an unexpectedly recent origin for an isolated desert spring fish. BMC Ecol Evo 24, 2 (2024). https://t.co/v6c6RYQ9Ow
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@molecology
Molecular Ecology
2 years
New in ME! Snake fungal disease (SFD) infects >40 🐍 species. Experimental transcriptomics by @SamarthPhD et al show SFD is likely systemic with chronic effects on hosts with đŸ„¶â„ïž temperature often resulting in severe responses. link-> https://t.co/inI0BYmpg4 📾 @AnacondrewMason
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@martykardos
Marty Kardos
2 years
My commentary in PNAS on a very nice genomics paper on endangered Massasauga rattlesnakes by @SamarthPhD Samarth Mathur, Lisle Gibbs, @GibbsLabOSU et al.
@SamarthPhD
Samarth Mathur
2 years
Stemming from the discourse in conservation bio & molecular genetics, our study shows adaptive & neutral variation is indeed correlated, But it’s more nuanced, as recent population declines breaks the link & makes future assessments less predictable | PNAS https://t.co/hHjDFUIgng
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@martykardos
Marty Kardos
2 years
Is neutral genetic variation a good predictor of the variation that matters?
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@SamarthPhD
Samarth Mathur
2 years
Thanks to the coauthors and labs who collaborated on this work @GibbsLabOSU @Turtle_Doc @WildlifeEpiLab Ellen Haynes. Funding: @OhioDivWildlife @OhioState and @EEOB_OSU
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@SamarthPhD
Samarth Mathur
2 years
Conclusion: SFD may be a systemic disease where chronic fungal infections might lead to the most profound physiological changes. We report candidate genes and putatively functional loci that can help future studies to improve our understanding of SFD host–pathogen dynamics.
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@SamarthPhD
Samarth Mathur
2 years
Major results: 1. Although we found fungal activity to be localized on skin, most of the differential gene expression occurred in internal tissues. 2. Temp. played an important role as infected snakes maintained at the lower temp. had more severe clinical signs.
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@SamarthPhD
Samarth Mathur
2 years
We performed controlled infection in captive Prairie rattlesnakes with O. ophidiicola at two different temps: 20 and 26°C. We then compared liver, kidney, and skin transcriptomes to assess tissue-spe-cific genetic responses to O. ophidiicola infection. #RNASeq Methods Overview:
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@SamarthPhD
Samarth Mathur
2 years
Caused by fungus Ophidiomyces ophidiicola, clinical signs of SFD vary among individuals and range from lethargy, skin lesions and excessive shedding, to skin crusts, granulomas, corneal opacity and ulcers on the head and body in more severe cases. Image: 10.1098/rstb.2015.0457
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@SamarthPhD
Samarth Mathur
2 years
Infectious diseases are an increasing threat to global wildlife diversity; most infamous are chytrid in amphibians and white-nose syndrome in bats. Ophidiomycosis (snake fungal disease; SFD) is an emerging fungal disease in wild and captive snakes. Read:
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vetmed.illinois.edu
If you don't keep up with infectious diseases affecting reptiles, then you may not be familiar with Snake Fungal Disease (SFD). SFD is attributed to the fungal pathogen Ophidiomyces ophidiicola, and...
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