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@RNAJournal
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The official journal of the RNA Society. Featuring cutting edge research in RNA Biology, biochemistry, genetics, cell biology, structural biology and genomics
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Joined November 2011
OMA-1 is a zinc finger RNA-binding protein required for oocyte maturation. This work identifies an arginine-rich peptide upstream of the zinc finger required for both RNA binding and embryogenesis. https://t.co/ke616Rh0cV
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The absence of an inductive effect confers pseudouridine residues with resistance to enzyme-catalyzed and spontaneous strand cleavage. https://t.co/m3LywpEN9z
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PACT suppresses PKR activation, thus preventing activation of the integrated stress response, NF-κB, and cell death. Dimerization and double-stranded #RNA binding by PACT is required for this function. https://t.co/bW5MoeI3P7
@KyleCottrell @PurdueBiochem @PUCancerInst
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Spatiotemporal NAIL-MS analysis shows that ALKBH5 does not affect global m6A turnover in human mRNA across subcellular compartments under standard growth conditions. https://t.co/s1QjOExxnd
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An internal 8U tract in a recoded influenza A virus segment causes viral polymerase slippage. This in turn leads to truncated protein production, interferon stimulation and reduced virus production. https://t.co/jeGoXwkhQ3
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FBF-1 RNA binding is not regulated by its C-terminal tail (CT), whereas highly similar FBF-2 is inhibited by its essential CT. Partner protein competes with CT binding to regulate FBF-2 but not FBF-1. https://t.co/P1qoPuNKK2
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We present a method to profile RNA within membrane-less organelles, utilizing in situ transcription and linear amplification. We substantiate the accumulation of immature pre-mRNAs in stress granules. https://t.co/dfSp37sMtB
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Two-step VEGF HDB recognition by an aptamer, t44.27, was unveiled. Transient interaction was followed by a tight-complex formation and latter of which is essential to antagonize heparin binding. https://t.co/U3x2LtaAIG
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Coevolution of protein-only RNase P and tRNA genes in Aquifex aeolicus: most precursor tRNAs have an A residue upstream of the 5’-cleavage site and generally lack stable acceptor stem extensions. https://t.co/0wlueCfT6j
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In silico λ-dynamics accurately predicts interactions of modified RNA to a model RNA-binding protein. The work opens opportunities to study modified RNA-protein interactions without in vitro reagents. https://t.co/sqwvLyYxge
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Translational helicases eIF4A, Ded1 and Slh1 are found to be dispensable for mRNA scanning in search of the start codon by 40S ribosomes. Instead, mRNA scanning is driven by one-dimensional diffusion. https://t.co/k9zMtbjtS9
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Visualization of full-length 7SK and 7SL RNAs tertiary atomistic models derived using small-angle x-ray scattering, coarse-grained modelling, and molecular dynamics simulations. https://t.co/IPQtK4jvPB
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Stress granules elevate p21 RNA levels and reduce Rb phosphorylation, promoting cell cycle exit. https://t.co/clmirQv4VD
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Rampant A-to-I RNA editing in Drosophila lncRNA roX1 is non-adaptive and does not provide a selective advantage to the organism. https://t.co/9de1AV13mt
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Eukaryotic translation initiation factors (eIFs) 5 and 2B compete for eIF2. The three binding sites on eIF2β (K1, K2, and K3) allow simultaneous binding and faster mutual displacement from eIF2γ. https://t.co/psIae16PzH
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DNA plasmid constructs were used to produce dsRNA via in vivo transcription within E. coli, or via in vitro transcription. Analysis was performed to quantify the dsRNA produced and measure dsRNA product quality. #dsRNA #T7Polyermase @sheffielduni
https://t.co/BpAgz9IDme
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RNA modifications in T cells are more stable than expected—primary and immortalized cells share most sites, suggesting common regulatory features can be studied across systems. https://t.co/VJKaVJKNcL
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M6A methylation of the Dand5 3’UTR blocks Bicc1 binding, suggesting it may limit the silencing and/or decay of this and potentially other mRNAs that is induced by flow-sensing cilia. https://t.co/gCFsZacnSq
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U7 snRNA binds a ring of seven proteins, including Lsm10 and Lsm11, forming U7 snRNP core. This report identifies 3 proteins (blue) that interact with U7 snRNA and may participate in the assembly of this unusual and functionally critical ring. https://t.co/Y5H2VrdFEJ
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Free tRNALeu shows flexible variable arm and CCA end, reshaped by LeuRS and ribosome binding. #tRNA #StructuralBiology @RNAJournal @GIST_science
https://t.co/jTUbSjj1Eg
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