GenScale Team
@GenscaleTeam
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GenScale is a bioinformatics research team. Its main goal is to develop scalable methods, tools, and software for processing genomic data.
Joined January 2019
GenScale team leaves X/twitter. This is our last post here. Let's meet back on bluesky:
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Possibly one of the most significant breakthroughs in sequencing data exploration today! Proud to have been part of this journey with @GenScale 🧬✨.
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RT @interstices_eu: 📰🧬Indexer les données génomiques : un défi de taille à relever. Découvrez les travaux de recherche sur les données géné….
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RT @KarelBrinda: Have you ever wondered how the NCBI Bacterial Assembly DB has grown over time? And what have been the contributions of ind….
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RT @Inria_Rennes: [Prix🏆].Félicitations🎉 à Roland Faure (doctorant) & Tam Khac Minh Truong (ancien stagiaire) de l'équipe @GenscaleTeam qui….
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Congrats to Roland Faure, for his great talk about HairSplitter at #ISMBECCB2023. Go talk to Roland in front of his poster to learn more about how he manages to separate strain genomes in metagenomic long read datasets (poster location 392)
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RT @irisa_lab: #vendrediLecture à lire dans @lemondefr .Un moteur de recherche de la génomique pour traiter la quantité de données collecté….
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RT @gaetan_benoit: Very happy to present metaMDBG, a new assembler for long accurate metagenomics reads (e.g. PacBio HiFi)!.
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RT @ClaireLemaitre: It's also very fast, genotyping >10,000 SVs with a 30X PacBio whole human dataset in less than 30 minutes! Try it on gi….
github.com
SV genotyper for long reads with a variation graph - SandraLouise/SVJedi-graph
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RT @ClaireLemaitre: SVJedi-graph is based on the construction of a variation graph representing the entire reference genome and all its alt….
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The Genscale Team is present at #ISMBECCB2023 with 2 talks: on strain genome resolution in metagenomics (Roland Faure) and on Structural Variant genotyping (Sandra Romain). Come meet us ! @ClaireLemaitre @KarelBrinda.
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RT @ClaireLemaitre: Very happy to announce the publication of our new SV genotyping tool for long read data: SVJedi-graph. Congrats to Sand….
academic.oup.com
AbstractMotivation. Structural variation (SV) is a class of genetic diversity whose importance is increasingly revealed by genome resequencing, especially
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