MALAT1 expression indicates cell quality in single-cell RNA sequencing data [NEW RESULTS]

Accurate isoform quantification by joint short- and long-read RNA-sequencing [NEW RESULTS]

Reinforcement learning guides single-cell sequencing in decoding lineage and cell fate decisions [NEW RESULTS]

Identifying Alzheimer's disease-related pathways based on whole-genome sequencing data [NEW RESULTS]

MAJIQ V3 offers improvements in accuracy, performance, and usability for splicing analysis from RNA sequencing [NEW RESULTS]

Accelerated dimensionality reduction of single -cell RNA sequencing data with fastglmpca [NEW RESULTS]

SCEMENT: Scalable and Memory Efficient Integration of Large-scale Single Cell RNA-sequencing Data [NEW RESULTS]

Nanopore Direct RNA Sequencing Reveals Virus-Induced Changes in the Transcriptional Landscape in Human Bronchial Epithelial Cells [NEW RESULTS]

Characterization of transcriptional heterogeneity and novel therapeutic targets using single cell RNA-sequencing of primary and circulating Ewing sarcoma cells. [NEW RESULTS]

Phasing Diploid Genome Assembly Graphs with Single-Cell Strand Sequencing [NEW RESULTS]

Damsel: Analysis and visualisation of DamID sequencing in R [NEW RESULTS]

Comparison of sequence- and structure-based antibody clustering approaches on simulated repertoire sequencing data [NEW RESULTS]

Sensitive tumor detection, accurate quantification, and cancer subtype classification using low-pass whole methylome sequencing of plasma DNA [NEW RESULTS]

VILOCA: Sequencing quality-aware haplotype reconstruction and mutation calling for short- and long-read data [NEW RESULTS]

A dedicated caller for DUX4 rearrangements from whole-genome sequencing data [NEW RESULTS]

Optimal sequencing depth for measuring the concentrations of molecular barcodes [NEW RESULTS]

GCRTcall: a Transformer based basecaller for nanopore RNA sequencing enhanced by gated convolution and relative position embedding via joint loss training [NEW RESULTS]

D-SPIN constructs gene regulatory network models from multiplexed scRNA-seq data revealing organizing principles of cellular perturbation response [NEW RESULTS]

Leveraging epigenetic signatures to determine the cell-type of origin from long read sequencing data [NEW RESULTS]

Amplified DNA Heterogeneity Assessment with Oxford Nanopore Sequencing Applied to Cell Free Expression Templates [NEW RESULTS]