Chao Chen Profile
Chao Chen

@ChaoChenSBU

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307
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310
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83

Faculty @stonybrooku @sbubmi @sbucompsc; Studies TDA; Topology and Geometry in Machine Learning and Biomedical Image Analysis

Joined November 2022
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@ChaoChenSBU
Chao Chen
2 months
Congratulations to @weimin_lyu on receiving the prestigious Catacosinos Fellowship, awarded annually to outstanding PhD students. Over the past three years, Weimin has published seven first-author papers in top venues including ICLR, ECCV, NAACL, EMNLP, and AMIA, with research.
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@ChaoChenSBU
Chao Chen
2 months
Attending #CVPR2025? Please check out our paper on MERGE, a multi-faceted hierarchical graph GNN for predicting gene expression from histopathology images. Congratulations to Aniruddha Ganguly for the amazing work. Please come to our poster at Session 3, Poster 475.Saturday
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@ChaoChenSBU
Chao Chen
2 months
Attending #CVPR2025? Please check out our paper on TopoCellGen. We propose the first diffusion network for cell topology generation, based on topological data analysis (TDA). The paper was selected for an oral presentation, an honor awarded to only about 0.7% of submissions.
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@ChaoChenSBU
Chao Chen
4 months
Attending #ICLR ? Please check out our paper studying the geometry of long-tailed representation learning. We provide theoretical insights into the skewed representation, as well as a practical algorithm to mitigate the issue. Poster: Thu 24 Apr 3 - 5:30 PM, Hall 3 + Hall 2B
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@ChaoChenSBU
Chao Chen
4 months
Attending #ICLR ? Please check out our paper on TopoDiffusionNet. We propose a novel method for training diffusion models that enables precise control over the generated topology, based on topological data analysis (TDA). Poster: Thu, Apr. 24, 3-5 p.m, Hall 3 + Hall 2B #162
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@ChaoChenSBU
Chao Chen
4 months
Attending #ICLR ? Please check out our paper on VLOOD. We propose a novel method for conducting backdoor attacks on vision-language models, with a particular focus on out-of-distribution datasets. Poster: Fri 25 Apr 10 - 12:30, Hall 3 + Hall 2B #298.
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@ChaoChenSBU
Chao Chen
5 months
So true. .
@PHDcomics
PHD Comics
5 months
Procrastination ∝
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@ChaoChenSBU
Chao Chen
10 months
Our #MICCAI2024 workshop on topology-informed image analysis just started. We have a full house! Aasa Feragen is talking about topoloy-preserving segmenting fetal cervical structures!.
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@ChaoChenSBU
Chao Chen
10 months
RT @SBUResearch: Assoc Prof @ChaoChenSBU & Assist Prof @PrateekPrasana are developing TopoQuant, a suite of informatics tools for breast ti….
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@ChaoChenSBU
Chao Chen
10 months
If you are attending #MICCAI2024, please join us at our Workshop on Topology- and Graph-Informed Imaging Informatics (TGI3). The central theme is to explore rich topology and graph information in image analytics.
topology-miccai.github.io
MICCAI 2024 Workshop
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@ChaoChenSBU
Chao Chen
10 months
Check out our new #MICCAI2024 paper on using diffusion model to generate cell layouts for tumor microenvironment. Conditioning on cell counts and cell density turns out to be a powerful trick. #DigitalPathology #diffusion
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@ChaoChenSBU
Chao Chen
10 months
Check out our new #MICCAI2024 paper on learning better representations of pathology images through hard negative sample mining. Focusing on negative samples can significantly improve learning efficiency. #DigitalPathology
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@ChaoChenSBU
Chao Chen
10 months
Check out our new #MICCAI2024 paper on disentangling pathology image features. #DigitalPathology
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@ChaoChenSBU
Chao Chen
10 months
Please check out our #ECCV2024 paper studying the vulnerability of vision language model #VLM. Done by our amazing student @weimin_lyu . The paper can be found at .
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@ChaoChenSBU
Chao Chen
10 months
Check out our #ECCV2024 paper. We propose topological consistency loss for semi-supervised segmentation. This was applied to #ComputationalPathology, but can apply to many other problems. Paper and code can be found at .
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@ChaoChenSBU
Chao Chen
10 months
RT @CEASSBU: Professor Chao Chen (l) and Assistant Professor Prateek Prasanna in the Department of Biomedical Informatics are developing a….
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@ChaoChenSBU
Chao Chen
1 year
So excited to start our project funded by @NIH @theNCI with @PrateekPrasana and collaborators. We will develop topological methods for breast cancer research. #topology.
@PrateekPrasana
Prateek Prasanna
1 year
Excited to receive the NOA of my first @NIH @theNCI #R01 with @ChaoChenSBU! We will develop new techniques to characterize breast parenchyma on imaging. Grateful to my wonderful team and collaborators @sbubmi! @SBUResearch @rfsuny
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@ChaoChenSBU
Chao Chen
1 year
RT @DaliWorkshop: 🚨 Exciting news! The submission deadline for our ADSMI workshop is now extended to June 29 (23:59 PST), 2024. Plus, we're….
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