HPA CellAtlas
@CellProfiling
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Mikaela Wiking and Frida Danielsson. Tweeting about science & updates from the CellProfiling group @SciLifeLab. Opinions are our own.
Stockholm
Joined May 2012
New IF data is available, and choice of cell lines for analysis are now based on RNAseq data. http://t.co/xOdApCVV9Z
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The Human Protein Atlas v11 is now released! http://t.co/xOdApCVV9Z
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Highlight of the week: We will get celebration cake this afternoon! Will let you know why soonish.
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So proud of awesome Dr. Charlotte Stadler for that Nature method publication :)
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Nature Methods: "IF and fluorescent-protein tagging show high correlation for protein loc. in mammalian cells." http://t.co/a1C42E2J81
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Publ. in JPR: "RNA deep sequencing as a tool for sel. of cell lines for systematic subcell. loc. of all hm proteins." http://t.co/BZv4C8L6PW
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Lotsa things going on the group lately. Several publications come out, incl. Nature Method one!
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They even want me to reply to Mathias Uhlén's congratulatory email (on release 10.0 of http://t.co/dMHNGd4X) with #wootwoot. I think not.
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On positive side: The release gave me the possibility to introduce "woot woot" at work. Everyone's really excited about the new it-word!
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Also, the HPA project is divided into diff sites. Those at AlbaNova get cake. Yes, we're about upset about not being invited. #lasttweet
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Bad thing about PI:s being at #HUPO2012: We don't get cake nor champagne to celebrate the release. #wegotitlasttime
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Reg. last RT: Our PhD student Charlotte Stadler were among the finalists w 2 images, see eg. http://t.co/jDJaF7EO
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Biotechniques had a Proteomics Art Contest! Intrigued, I followed the link... http://t.co/tAPiYogX
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We're really proud about the dictionary (in case you couldn't tell). And the new release. Of course. But mostly the dictionary #myownopinion
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Check out the dictionary at http://t.co/PGTQPbow and the CELLPROFILING DICT. at http://t.co/fIstQKzF
#proteinatlas #HUPO2012 woot woot!
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Now w. a dictionary feat. IHC (normal and cancer) and IF images with info about staining and interpretetion. #proteinatlas #HUPO2012
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The new release contains 17k ab:s, corresp. to 14k human genes (～70% of the human genome) http://t.co/dMHNGd4X
#proteinatlas #HUPO2012
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The new protein atlas (version 10.0) has been released at #HUPO2012! Go check it out at http://t.co/dMHNGd4X
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>> All of them are great presenters, and we really encourage you to listen to them! #HUPO2012
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>> and Mathias Uhlen is presenting the Nature Antibodypedia Portal (10/9) and how siRNA can validate IF data (13/9) #HUPO2012 >>
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