VirHostNet 2.0
@virhostnet
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🦠 / 🚹🐵🐷🐮🐭🐀🦟🌿🌾🍅Virus-Host protein interactions Network #knowledgebase @postgresql #virology #COVIDー19 #SARSCOV2 #biocuration #interactome #openscience
Lyon, France
Joined July 2014
We are seeking a highly motivated Postdoc to work @amsb_prabi @UnivLyon1 with our interdisciplinary team on #bioinformatics #biogeography solutions to better understand how biogeography shape viral biodiversity at the planetary-scale🦠🌍! More info here: https://t.co/1l4L6i2jll
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After several weeks of servers shutdown due to an update of our cloud infrastructure, all the Virhostnet services are now running again, including access to PSIMI-TAB rawdata through our PSICQUIC web services >>> https://t.co/LtB7cLNEni . Enjoy virus/host exploration again !
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Join the #virhosnet team on #bluesky to follow our last developpment on virus host interaction networks ! https://t.co/QxZFTuwMbu
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Get ready! Negative Strand RNA Virus meeting #NSV2025 registration will open soon! Co-organized with @wendybarclay11, @vsv512 and Paul Duprex. It will be in vibrant Montpellier, south of France, in June 2025! Please RT
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color me skeptical. Actually, given the incredibly broad and bold claims in this paper, color me *extremely* skeptical
🧬Evo, the first foundation model trained at scale on DNA, is a Rosetta Stone for biology. DNA, RNA, and proteins are the fundamental molecules of life—and cracking the code of their complex language is an ongoing grand challenge. 🔬Today in @ScienceMagazine, the labs of Arc
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This is #bioinformatics science fiction but real. Pan-SRA nucleotide search; for free; in minutes 🤯
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If you work with metagenomes (or metatranscriptomes), would like to explore what viruses/phages are in your datasets, but don't know where to start, we have (an) MVP for you now \o/ Really happy to see this one published, and also welcoming feedback/suggestion of improvement!
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Dr. Babaian (@RNA_Life) and his team are doing big things. Using computational biology and AI, he identified over 150k+ new RNA viruses in only 11 days. That number will grow to 100 million by 2030. Ep. 12 | In Vivo with Dr. Artem Babaian on Planetary Wide Virus Surveillance -
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'Virology—The next fifty years' - a perspective by Eddie Holmes, @GoodrumVirusLab and myself in Cell https://t.co/jOJWY6BPqI
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🆁🅴🅲🆁🆄🆃🅴🅼🅴🅽🆃 L'équipe du projet Virome@tlas, financé par #shapemedlyon recherche un ou une ingénieur/ingénieure en bioinformatique. @UnivLyon1 @amsb_prabi
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We are seeking a highly motivated engineers to work @amsb_prabi @UnivLyon1 with our interdisciplinary team on #bioinformatics solutions to better understand how biogeography shape viral biodiversity at the planetary-scale @ShapemedLyon More info here:
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Phylogenetic results and resources are described in this blog post: https://t.co/BfBhUHXIgx 3/3
nextstrain.org
Nextstrain blog post from 2024-06-18; author(s): Trevor Bedford, Jover Lee, James Hadfield, John Huddleston, Louise Moncla
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We are seeking two highly motivated candidates to work together with our interdisciplinary team to better understand how biogeography shape viral biodiversity ! @ShapemedLyon To postulate : #bioinformatics : https://t.co/RscPydYNrX
#geoinformatics : https://t.co/Wa9SSzwc4w
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Excited to share Vclust! It's a fast and accurate tool for calculating intergenomic similarities (like ANI) and clustering virus/#phage genomes/contigs according to ICTV and MIUViG standards. 💻 Tool: https://t.co/vaP81tVp6T 📄 Preprint: https://t.co/PkUXLPhvsS Thread! 1/6 ↓
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We are seeking two highly motivated candidates to work together with our interdisciplinary team to better understand how biogeography shape viral biodiversity ! @ShapemedLyon To postulate : #bioinformatics : https://t.co/RscPydYNrX
#geoinformatics : https://t.co/Wa9SSzwc4w
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The #phylogenetic tree has been a core conceptual tool for #EvolutionaryBiology for nearly 200 years. @RoliRoberts explores the role of the tree as a metaphor, discussing two new #PLOSBiology Essays (by @jlsteenwyk & @caseywdunn) that look to the future https://t.co/7gLOg2kRpZ
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An analysis of publicly available viral genomes explores the evolutionary dynamics of host jumps and shows that humans are as much a source of viral spillover events to other animals as they are recipients. https://t.co/y6AQ4j6BEx
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The evolutionary drivers and correlates of viral host jumps
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And here it is. The cover of this month's @TrendsImmuno issue features our favourite mammal, bats! Thanks to Brock and Sherri Fenton for sharing their fabulous photograph. Our first time on a cover. We are very pleased. #LZCI
Can we translate research on bat immunity to improve human health? Postdoctoral fellow, Dr. Baid and collaborators, Drs. Irving and Jouvenet weigh in on this emerging topic. #Bats #translationalresearch 🦇 @BaidKaushal @lab_jouvenet @BatResearch #LZCI
https://t.co/DEMbFjxRe7
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