rohan @ ml4h & neurips
@rohanbanerjeee
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health ai @ICMtl, ms cs @mila_quebec; prev @harvardmed, @srm_univ
montreal
Joined August 2014
๐ขNew preprint and data alert! 1/ EPISeg: Automated segmentation of the spinal cord on echo planar images using open-access multi-center data Preprint: https://t.co/tbOfu8Wt0E Dataset: https://t.co/22NHqWdVLA More in the thread ๐งต
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Work done with the super awesome โJacques Delfrate and @RobertAvramMD at the https://t.co/AD7Yr6e21s @ Montreal Heart Institute (@ICMtl)
heartwise.ai
Our mission is to create practical, equitable AI solutions to revolutionize cardiovascular care.
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Presenting our work on ECG signal tokenization and automated report generation, interpretation at the #NeurIPS2025 Foundation Models for the Brain and Body workshop, tomorrow! If you're interested in Multimodal AI and Healthcare, let's chat! https://t.co/tb9Ym4n7kA
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๐ง Working on a radiology or cardiology AI model? Bring YOUR model to PACS-AI. Weโre building an open-source platform to run CV models directly in clinical imaging workflows. ๐ Featured in CIFAR Reach โ https://t.co/yipXvXhYA5 ๐ฌ DM me for Slack access ๐ Open release this
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Always a computer science nerd at heart โ grateful to put it to good use helping people and making a real difference in medicine. Thank you to the Fondation de lโInstitut de Cardiologie de Montrรฉal @ICMtl for the feature and support. https://t.co/XqHKV8b93c
fondationicm.org
At the head of the HeartWise.AI lab, Dr. Robert Avram leads interdisciplinary projects that integrate AI to improve cardiovascular care.
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New preprint! ๐ง ๐ค How do we build neural decoders that are: โก๏ธ fast enough for real-time use ๐ฏ accurate across diverse tasks ๐ generalizable to new sessions, subjects, and species? We present POSSM, a hybrid SSM architecture that optimizes for all three of these axes! ๐งต1/7
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Every frontier AI system should be grounded in a core commitment: to protect human joy and endeavour. Today, we launch @LawZero_, a nonprofit dedicated to advancing safe-by-design AI. https://t.co/6VJecvaXYT
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๐จ Preprint Alert ๐ ๐ seq-JEPA: Autoregressive Predictive Learning of Invariant-Equivariant World Models https://t.co/vJaFyoQZvV Can we simultaneously learn both transformation-invariant and transformation-equivariant representations with self-supervised learning (SSL)?
arxiv.org
Current self-supervised algorithms commonly rely on transformations such as data augmentation and masking to learn visual representations. This is achieved by enforcing invariance or equivariance...
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EXCITED To share our publication on the clinical Deployment of Real-Time LVEF estimation during coronary angiogram in @NEJM_AI ! CathEF, a deep learning model integrated into PACS-AI ( https://t.co/NCY1a0x8RV), estimates left ventricular ejection fraction (LVEF) in real time from
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Introducing nanoAhaMoment: Karpathy-style, single file RL for LLM library (<700 lines) - super hackable - no TRL / Verl, no abstraction๐โโ๏ธ - Single GPU, full param tuning, 3B LLM - Efficient (R1-zero countdown < 10h) comes with a from-scratch, fully spelled out YT video [1/n]
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๐๐ก๐จ๐ฎ๐ ๐ก๐ญ๐จ๐ฅ๐จ๐ ๐ฒ paper is out! ๐ฅ๐ We study the reasoning chains of DeepSeek-R1 across a variety of tasks and settings and find several surprising and interesting phenomena! Incredible effort by the entire team! ๐: https://t.co/CDlFHD28xQ
Models like DeepSeek-R1 ๐ mark a fundamental shift in how LLMs approach complex problems. In our preprint on R1 Thoughtology, we study R1โs reasoning chains across a variety of tasks; investigating its capabilities, limitations, and behaviour. ๐: https://t.co/Cyy18kYQ45
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๐ Super excited to announce UI-Vision: the largest and most diverse desktop GUI benchmark for evaluating agents in real-world desktop GUIs in offline settings. ๐ Paper: https://t.co/qJprMkzzH3 ๐ Website: https://t.co/N4hCpcd8dK ๐งต Key takeaways ๐
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Presenting โจ ๐๐๐๐๐: ๐๐๐ง๐๐ซ๐๐ญ๐ข๐ง๐ ๐๐ก๐๐ฅ๐ฅ๐๐ง๐ ๐ข๐ง๐ ๐ฌ๐ฒ๐ง๐ญ๐ก๐๐ญ๐ข๐ ๐๐๐ญ๐ ๐๐จ๐ซ ๐๐ฏ๐๐ฅ๐ฎ๐๐ญ๐ข๐จ๐ง โจ Work w/ fantastic advisors @DBahdanau and @sivareddyg Thread ๐งต:
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8/ The method is open-source and available as part of the Spinal Cord Toolbox (SCT)๐ Have questions or feedback? Let us know! Weโd love to hear how EPISeg can support your research.
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7/ This work wouldnโt have been possible without the amazing contributions from multi-site collaborators, open-source community, @PolyNeuro , @Mila_Quebec and @StanfordPain . We hope EPISeg helps research paving the way for new insights into spinal cord function and dysfunction.
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6/ What sets EPISeg apart? โข Trained via active learning, improving robustness over multiple iterations. โข Works across different scanner protocols and resolutions. โข Handles clinical cases, including data from patients with myelopathy and fibromyalgia.
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5/ To build EPISeg, we created an open-access dataset of SC fMRI along with the segmentations from 15 sites, covering 406 participants with varying scanner setups and conditions.
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4/ Our solution: EPISeg uses a deep learning model trained on diverse, multi-center dataset of gradient-echo EPI images to perform fully automated SC segmentation. Itโs fast, accurate, and robust to: โข Low-resolution images โข Distortions โข Signal drop-outs โข Motion artifacts
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3/ Until now, spinal cord (SC) segmentation on EPI data required time-consuming manual corrections prone to user bias and errors.
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2/ Spinal cord fMRI is critical for studying sensation, movement, and autonomic function. However, preprocessing SC fMRI data like segmenting the spinal cord is challenging due to low spatial resolution, susceptibility artifacts, motion and ghosting artifacts and poor SC contrast
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