Pieter Mestdagh Profile
Pieter Mestdagh

@pieter_mestdagh

Followers
623
Following
950
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565

PI @ Ghent University - oncoRNAlab. Computational Biology manager @ CellCarta

Gent - Brugge
Joined October 2012
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@IgorUlitsky
Igor Ulitsky
2 years
If you read 1 thread this week, read this one. BTW, this all got accelerated by a preprint on @biorxivpreprint that @VGaneshMDPhD saw before our Chaserr paper came out + big shoutout to @GeneMatcher which helped finding other cases that otherwise would take a decade to locate.
@VGaneshMDPhD
Vijay Ganesh
2 years
Long non-coding RNAs comprise a large part of the genome, yet loss of one copy (haploinsufficiency) of a lncRNA is not known to cause a human disease. Read our preprint to learn how deletions of the lncRNA CHASERR cause a severe neurodevelopmental disorder. https://t.co/JgjDvIcwer
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@_Rory_Johnson_
Rory Johnson
2 years
**please share** #Opportunity We are hunting for a special #CEO to drive an exciting project to develop new #rna medicines for #cancer patients
@GOLDLab_UCD
GOLD Lab
2 years
**please RT!** 🌟🏄 We're seeking a #CEO for exciting new venture to create the next generation of #oncology #therapeutics based on #rna. More details here
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@jvdesomp
Jo Vandesompele
2 years
Welcome to Prof. Tosar @jptosar's talk on January 12th in Gent at 13:00. "Uptake and recognition of naked extracellular RNAs & potential diagnostic applications" @crighent #OncoRNALab
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@CellCarta
CellCarta
2 years
Immune checkpoint inhibitor response prediction improves patient selection, but can be time-consuming and costly. Read about a new and accurate model that uses only RNA-sequencing data, making it simpler and cheaper: https://t.co/7KZWvasOf7 #PrecisionMedicine #ClinicalTrials
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@lexogen
Lexogen
2 years
The authors dealt with a special sample type: muscle fibers isolated from human biopsies. To understand the true heterogeneity of human skeletal muscle fibers, they used #QuantSeq-Pool to transcriptionally profile over 1000 single muscle fibers. https://t.co/jZdMz1vBeK
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@iPC_H2020
iPC_H2020
2 years
📽 As we start our last project month, we want to make this something special That's why we worked on a video that will illustrate you the impact of #iPC We don't want to spoil too much, so watch how we are bringing hope back to children with cancer 🎬👉
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@pieter_mestdagh
Pieter Mestdagh
2 years
Amazing venue to talk science. First time ever I presented in a church. Thank you @BRIC_Bordeaux for organising.
@crighent
CRIG
2 years
CRIG is well represented at the first @enlight_eu Cancer Days in Bordeaux! @pieter_mestdagh @ugent kicks off day 2 in this great auditorium. Looking forward to collaborate with @BRIC_Bordeaux, @CancerUniGalway @uniGoettingen @upvehu
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@CellCarta
CellCarta
2 years
Immune checkpoint inhibitor response prediction improves patient selection, but is time-consuming and costly. Read about a more accurate model that uses only RNA-sequencing data, making it simpler and cheaper: https://t.co/7KZWvasOf7 #PrecisionMedicine #ClinicalTrials
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@AnHendrix2
An Hendrix
2 years
And … we're hiring! The Hendrix lab is also recruiting a #Postdoc funded by @ERC_Research to explore #ExtracellularVesicles in #cancer. Interested to work on this exciting project @ugent @crighent? Read & apply here: https://t.co/rYyRkLqI7z
jobs.ugent.be
Post-doctoraal medewerker
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@pieter_mestdagh
Pieter Mestdagh
2 years
Deze ochtend aan de eettafel: ‘Papa, waarom werk je eigenlijk in het weekend?’ ‘Omdat ik nog werk heb.’ ‘Krijg je dat niet af in de week?’ ‘Nee.’ ‘Dus je werkt te weinig?’ Zo had ik het nog niet bekeken…
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@jvdesomp
Jo Vandesompele
2 years
Registrations are open for our #EUDIP2024 European Digital PCR Symposium and Workshop in Feb 2024 https://t.co/eUhMvmH32Z with @JimHuggett @GuroLind @FraleyLab @Roche @QIAGEN @thermofisher @StillaTech @BioRadGenomics Sniper,
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@pieter_mestdagh
Pieter Mestdagh
2 years
Very exciting work and happy we were able to contribute with RNA-seq of single muscle fibres.
@ThibauxV
Thibaux Van der Stede
2 years
Are all fibers in skeletal muscle created equal? How important are myosin heavy chains isoforms? In a joint effort between @TeamDerave and @AtulDeshmukh lab, we tried to answer these (and more) questions. #myotwitter #muscle A 🧵on our preprint (1/24) https://t.co/61Nl1YEjCI
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@pieter_mestdagh
Pieter Mestdagh
2 years
Our article ‘RNA biomarkers from proximal liquid biopsy for diagnosis of ovarian cancer’ has been included in the Ovarian Cancer Awareness Month article collection. 👉 https://t.co/PAl8cAL0Nv @EHulstaert @jvdesomp @OncologyAdvance
elsevier.com
Welcome to our Elsevier’s Oncology Journal Network Highlights page
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@Genomics_Guy
Gary Schroth
2 years
If you do RNA-Seq from blood or EVs, than you need to read this: Benchmarking blood collection tubes and processing intervals for extracellular vesicle performance metrics - Dhondt - 2023 - Journal of Extracellular Vesicles - Wiley Online Library
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isevjournals.onlinelibrary.wiley.com
The analysis of extracellular vesicles (EV) in blood samples is under intense investigation and holds the potential to deliver clinically meaningful biomarkers for health and disease. Technical...
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@Frank_Txu
Francisco
2 years
Our manuscript: "Effective methods for bulk RNA-seq deconvolution using scnRNA-seq transcriptomes" has just been published in Genome Biology! 🥳 https://t.co/QUZNwUeuJy With Mohammad Najaf-Panah, Pavel Sumazin, @pieter_mestdagh et al. @bcmhouston, @theNCI, @ugent & @iPC_H2020
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genomebiology.biomedcentral.com
Background RNA profiling technologies at single-cell resolutions, including single-cell and single-nuclei RNA sequencing (scRNA-seq and snRNA-seq, scnRNA-seq for short), can help characterize the...
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@CellCarta
CellCarta
2 years
Now you can accurately predict responses to immune checkpoint inhibitors using only RNA-sequencing data. Discover the computational pipeline making it possible — and how you can use it in your research: https://t.co/0TSyaCi1aB #PrecisionMedicine #Bioinformatics
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@angelosgeo
Angelos Georgakis
2 years
BIOTECH IS A TEAM SPORT When George Yancopoulos, the Cofounder and CSO of Regeneron, was a postdoc at Columbia and received a faculty position offer, the Department Chair took him out to dinner and said: "I want to be clear with you about one thing. Once you start your own lab,
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@jvdesomp
Jo Vandesompele
2 years
Finally, extracellular RNA is coming of age. Great progress in our OncoRNALab at @crighent with @pieter_mestdagh @AnnelienMorlion
@medrxivpreprint
medRxiv
2 years
Patient-specific alterations in blood plasma cfRNA profiles enable accurate classification of cancer patients and controls https://t.co/HtQg42eZBd #medRxiv
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@CellCarta
CellCarta
2 years
Upcoming webinar alert! Register for free to our May 31st webinar from expert, Pieter Mestdagh . Get exclusive insight into immune checkpoint inhibitor response predictions using only RNA-sequencing data: https://t.co/bKHuqa7dom #CellCarta #CROLaboratory #Precisionmedicine
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