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Dhiman Ray Profile
Dhiman Ray

@DhimanRay16

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Assistant Prof @uoCHandBIC, PostDoc @GroupParrinello @IITalk Genoa, PhD @UCIChemistry, BS-MS @iiserkol, Computational Biophysics (ML and MD Simulation)

Eugene, OR
Joined September 2019
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@DhimanRay16
Dhiman Ray
1 year
I am thrilled to announce that I have accepted a tenure-track assistant professor position at the Department of Chemistry and Biochemistry, University of Oregon, USA (@uoCHandBIC), starting in Fall 2024, in the beautiful city of Eugene in the Pacific Northwest. #compchem (1)
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@DhimanRay16
Dhiman Ray
4 months
RT @limmerlab: Introducing CECAM-US-WEST, a new CECAM node located at UC Berkeley. Programing starting next calendar year! @UCB_Chemistry @….
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@DhimanRay16
Dhiman Ray
4 months
RT @ML_Chem: Characterizing RNA Tetramer Conformational Landscape Using Explainable Machine Learning #machinelearning #compchem https://t.c….
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@DhimanRay16
Dhiman Ray
4 months
RT @GroupTuckerman: For any who are interested in working on machine-learning driven simulations of battery electrolyes using path-integral….
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@DhimanRay16
Dhiman Ray
4 months
RT @PaulRobustelli: Want to run and analyze MD simulations of a disordered protein?. Check out our step-by-step practical guide (+ tutorial….
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@DhimanRay16
Dhiman Ray
5 months
This work with former grad student Jack Hanni is now out in @JChemPhys Michele Parrinello Festschrift special issue as a tribute to my PostDoc advisor @GroupParrinello! #compchem @uoCHandBIC.
@DhimanRay16
Dhiman Ray
8 months
New preprint from my group at @uoCHandBIC: "Data-Efficient Learning of Molecular Slow Modes from Nonequilibrium Metadynamics". We use short biased trajectories to learn ideal CVs for enhanced sampling simulations using Koopman reweighting and Deep-TICA:
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@DhimanRay16
Dhiman Ray
5 months
We hosted Prof. @OmarValsson this week for our PChem Seminar @uoCHandBIC . It was great listening to his work on enhanced sampling simulation and we very much enjoyed our discussion about science and academic life!
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@uoCHandBIC
UO Chem and Biochem
5 months
TODAY! Physical Chemistry Seminar - Professor Omar Valsson, University of North Texas - April 14th @ 2pm in Tykeson 140
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@DhimanRay16
Dhiman Ray
5 months
RT @uoCHandBIC: Upcoming Physical Chemistry Seminar - Professor Gül Zerze, University of Houston - April 21st @ 2pm, Tykeson 140 https://t….
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Dhiman Ray
5 months
RT @mbuanand: Please RT. Thanks.
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Dhiman Ray
5 months
RT @uoCHandBIC: Upcoming Physical Chemistry Seminar - Professor Omar Valsson, University of North Texas - April 14th @ 2pm in Tykeson 140 h….
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@DhimanRay16
Dhiman Ray
5 months
RT @jppiquem: #compchem In the Big Data era, a change of paradigm in the use of molecular dynamics is required. Trajectories should be stor….
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Dhiman Ray
6 months
RT @barak_hirshberg: Come to the wonderful symposium @GiEmmePi1 and I organized at the @AmerChemSociety meeting in SD. phenomenal lineup:….
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@DhimanRay16
Dhiman Ray
6 months
Many thanks to Barak Hirshberg and @GiEmmePi1 for the kind invitation!.
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@DhimanRay16
Dhiman Ray
6 months
Attending the ACS Spring Meeting next week in San Diego? Check out the two talks from Ray group @uoCHandBIC by me and my postdoc @SompriyaC at the symposium on Inferring Kinetics, Thermodynamics, and Mechanisms From Enhanced Sampling Simulations. #ACSSpring2025
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@DhimanRay16
Dhiman Ray
6 months
RT @GiEmmePi1: 🚀 New preprint alert! 🚀. Introducing Loxodynamics, a simple yet powerful deep learning method for exploring chemistry and ca….
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@DhimanRay16
Dhiman Ray
7 months
This work is now out at @JCIM_JCTC! The first paper from the Ray group at @uoCHandBIC. Many congratulations to @SompriyaC for the hard work and determination!.
@DhimanRay16
Dhiman Ray
9 months
First preprint from my research group @uoCHandBIC: My postdoc Sompriya demonstrates the use of explainable representations of neural network CVs made using lasso regression surrogate models to perform enhanced sampling, #compchem
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@DhimanRay16
Dhiman Ray
7 months
RT @PaulRobustelli: Proud to share a new manuscript:. "Ensemble docking for intrinsically disordered proteins". from @DartmouthChem underg….
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@DhimanRay16
Dhiman Ray
8 months
RT @JorgensenWL: Some #FEP history. I presented our ethane to methanol calculations at an NSF workshop in Spring 1985 that was attended by….
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@DhimanRay16
Dhiman Ray
8 months
RT @XuhuiHuangChem: Our group’s 1st preprint in 2025: a tensor-based approach for CV identification, led by @SiqinCao in collaboration with….
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Dhiman Ray
8 months
RT @bussilab: 📢 Post-doc opportunity alert! Join the Molecular and Statistical Biophysics group at @Sissaschool . Choose your mentor from @….
bussilab.org
RNA, molecular dynamics, and more
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@DhimanRay16
Dhiman Ray
8 months
New preprint from my group at @uoCHandBIC: "Data-Efficient Learning of Molecular Slow Modes from Nonequilibrium Metadynamics". We use short biased trajectories to learn ideal CVs for enhanced sampling simulations using Koopman reweighting and Deep-TICA:
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