Yu-Shan Lin
@Yu_Shan_Lin
Followers
360
Following
515
Media
2
Statuses
48
Associate professor at Tufts University | Peptide computational chemistry. Molecular dynamics, machine learning, cyclic peptides, & drug development.
Cambridge, MA
Joined May 2016
Dept of Chem at @TuftsUniversity is hiring a TT faculty member at the rank of Assoc Prof, or at the rank of Assist Prof w/ a clear potential for promotion to Assoc Prof in <3 yrs, in any area of chemistry related to human health!
1
4
8
I'm happy to share that Tufts' trustees have approved my promotion to full professor (effective this July)!.
7
0
49
Had a fantastic time @ the Peptides GRC! Great talks & time meeting old & new friends. And so proud of Francini (Fonseca, joint student w/ @ChemKritzer), who did a poster & won the poster award 😊 Thank you, @HartsockWendy & Christina Schroeder, & congrats to all the awardees!
1
0
17
The Department of Chemistry @TuftsUniversity is seeking to hire a tenure-track faculty member for the Dr. Charles W. Fotis A37, AG39 Assistant Professorship in #compchem, broadly defined! For more info, please check out
0
5
19
Our department #Chemistry @TuftsUniversity is looking for a full-time #lecturer in introductory chemistry and a part-time #lecturer in #environmental chemistry . @Chemjobber.
0
2
5
Congratulations to the YSL group member @TiffaniHui @TuftsUniversity for her honorable mention for this year's @NSF GRFP! I am so proud of you and grateful for having you in the lab.
0
0
10
Is this normal, or should I go get my night vision checked 🤔😅.
1
0
1
Driving on a highway at night feels like playing Mario Kart to me—loop 1/3 and can’t see much ahead, exciting! Plus ppl zooming past you constantly, making you feel a big “12th” should show up on your windshield, and at any moment, you’ll hit a ? that turns you into a bullet 😆.
1
0
3
So proud of @J_Damjanovic_ ! And congratulations to all the CCG Excellence Award Winners!.
It was an honor to share this award with these brilliant young scientists and present my work at #ACSSanDiego.
0
0
1
We hope this approach (#StrEAMM = Structural Ensembles Achieved by Molecular Dynamics and Machine Learning) will make #MD an even more helpful tool for screening and designing #cyclicpeptides, be they well structured or not!.
0
0
1
We trained #ML models using #MD results of #cyclicpeptides to replace the need for running MD simulation when making structure predictions for new sequences.
1
0
1
Our paper "Structure prediction of cyclic peptides by molecular dynamics + machine learning" is published in @ChemicalScience!
2
2
51
Our recent paper on segment-based cluster analysis in @JCIM_ACS! Check out the tweets by @J_Damjanovic_ below and the paper here .
CATBOSS, a protocol developed by @Yu_Shan_Lin, Dr. James M. Murphy, and yours truly at @TuftsUniversity, published in @JCIM_ACS, allows for accurate and efficient analysis of noisy time series, such as MD trajectories
0
1
6
Gonna do a poster pitch at MALSI+ 2021 to talk about #cyclicpeptides #moleculardynamics #MachineLearning. Excited and a little nervous. Any tips and advice will be much appreciated! It shall be fun!.
#Cyclicpeptides can be the best of both worlds between #smallmolecules & #biologics for #therapeutic modality but challenges in de novo design held us back @Yu_Shan_Lin can tell you how their team can remove the barrier with #simulation & #machinelearning
0
1
7
If you are interested or know someone who might be interested, please send (or have them send) a CV and a couple of relevant publications to me at yu-shan.lin@tufts.edu Thank you! (3/3).
0
0
0
Must have a strong background in #MachineLearning methods and extensive experience in their applications; experience with enhanced sampling methods, #GROMACS, and #PLUMED a plus. (2/3).
1
1
2
My group, aka the YSL Lab at @TuftsUniversity (Medford, MA, USA), is looking for two postdoctoral researchers experienced in #MachineLearning and peptide molecular dynamics simulations to join us and work on #cyclicpeptide design or simulation analysis method development. (1/3).
5
38
64
Our review “Elucidating solution structures of cyclic peptides using molecular dynamics simulations" is published in @ACSChemRev! Certainly took a while (alright, a long time. ) May it be helpful to anyone interested in modeling these cool molecules!.
0
4
30
Congratulations to all the award winners! Special shoutout to YSL group alumnus @JuliaRuRogers!.
Virtual Awards ceremony for ACS COMP this Thursday -
1
0
6
Hosting my graduate advisor for a seminar at @TuftsUniversity today. Sitting at the hotel lobby waiting to take him for breakfast while realizing I forgot to clean my office. Complete panic mode or play it cool?.
2
0
11