Homa MP
@HomaMP4
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Joined October 2017
Our latest work, NICEgame, is now online! The NICEgame workflow allows the annotation of knowledge gaps, from the metabolite to the enzyme level, in genome-scale metabolic models, using known and hypothetical reactions. https://t.co/bB8LAXDpXC
biorxiv.org
Advances in medicine and biotechnology rely on the further understanding of biological processes. Despite the increasingly available types and amounts of omics data, significant biochemical knowledge...
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Check out ARBRE, our new computational resource and comprehensive search tool to predict and rank pathways towards industrially important aromatic compounds! The latest work by @AnastasiaSves, @HomaMP4 and @Vassily_13
https://t.co/weFMMNMoP8
biorxiv.org
Synthetic biology and metabolic engineering rely on computational search tools for predictions of novel biosynthetic pathways to industrially important compounds, many of which are derived from...
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Beyond happy that my 1st paper from #PhD is published @NatureComms. yETFL is the first Metabolism & Expression Model for the #yeast and the first constraint-based model for a eukaryote capturing expression and metabolism. More details in the thread (1/5). https://t.co/JMACbyJtJ0
nature.com
Nature Communications - Formulating metabolic networks mathematically can help researchers study metabolic diseases and optimize the production of industrially important molecules. Here, the...
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The new https://t.co/8BbReqC764 database may help scientists assess potential drugs more quickly, including how they are metabolised by the body and their potential side effects. https://t.co/BjRC8jAmOX
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Find our latest work now online @eLife. Congratulations to everyone involved! https://t.co/d7mzzuPg7D
elifesciences.org
The new NICEdrug.ch database may help scientists assess potential drugs more quickly, including how they are metabolised by the body and their potential side effects.
The new https://t.co/8BbReqTIuE database may help scientists assess potential drugs more quickly, including how they are metabolised by the body and their potential side effects.
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The new https://t.co/8BbReqTIuE database may help scientists assess potential drugs more quickly, including how they are metabolised by the body and their potential side effects.
elifesciences.org
The new NICEdrug.ch database may help scientists assess potential drugs more quickly, including how they are metabolised by the body and their potential side effects.
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Our latest work on heterologous biosynthetic pathways has just been highlighted by the editors! A big congrats to all the authors and a thank you @NatureComms. Find the article and other Biotech highlights
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Meet the #NCCRWomen! Today we introduce you to @EVayena, an @NCCRMicrobiomes PhD student @realLCSB @EPFL_en @EPFL_BioE. Evangelia develops computational tools to study cellular metabolism. Find out more here: https://t.co/nei20uH8MG
#WomenInSTEM #WomenInScience #GirlsCanCode
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A novel ME model for S. cerevisiae! The latest work from @oftadehomid, @psalvy_, Maria, Maxime, Misko, and @Vassily_13 now available as a preprint: https://t.co/ftM0Tmj928
biorxiv.org
Eukaryotic organisms play an important role in industrial biotechnology, from the production of fuels and commodity chemicals to therapeutic proteins. To optimize these industrial systems, a mathem...
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Our latest work exploring the biochemical space is now available as a preprint https://t.co/9iYPfzQz6A. Congratulations Jasmin, @HomaMP4, Anastasia, Victor, and @Vassily_13 to this progress!
biorxiv.org
Metabolic “dark matter” describes currently unknown metabolic processes, which form a blind spot in our general understanding of metabolism and slow down the development of biosynthetic cell factor...
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Our work about a first of its kind functional cell surface display of nucleic acid polymerase and its application in directed evolution has been published! https://t.co/sNZ0ogOHlz
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Wanna know what happens inside E.coli when it has too much to eat ? My preprint on the use of dynamic ME-models to study diauxie in E. coli is out! Big thanks to @Vassily_13 @pacmen_itn @DDDeCaF for the help along the way https://t.co/o7A8VAgb8O
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Due to the urgency of effective #COVID19 treatments, researchers highlight the importance of drug repurposing to combat #SARSCoV2 and improve health outcomes for patients. A review from @iScience_CP : https://t.co/vvsPn3RGv1
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It is always exciting to see experiments validating your "blind/unbiased" computational predictions! :) https://t.co/gPgEwr3KC0 This work validates annotation, localization, and role in fatty acid elongation (FAE)... 1/2
biorxiv.org
Lipid metabolism is a crucially important area of biochemistry, and cells use fatty acids for membrane biosynthesis, energy storage and the generation of signaling molecules. A 3-hydroxyacyl-CoA...
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UPDATE! Thank you all for your feedback! https://t.co/GilVhVNB8v platform is now accessible! Enjoy your analyses on #DrugMetabolism! We have also included a study case on #COVID19: https://t.co/jUIsgjsje5
@AnushChP @NoushinHadadi,Jasmin, Kiana,@Vassily_13 @pacmen_itn @realLCSB
biorxiv.org
The discovery of a drug requires over a decade of enormous research and financial investments—and still has a high risk of failure. To reduce this burden, we developed the NICEdrug.ch database, which...
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🚨UPDATE! Thank you all for your feedback! https://t.co/kA57x96LWT is now accessible 🔥! Enjoy your analyses on #DrugMetabolism 💡! We have also included a study case on #COVID19 🦠💊😷🎯: https://t.co/IPzAZD3I2j Team 💪🙅♀️: @HomaMP4, Kiana, Jasmin, @NoushinHadadi, @Vassily_13
biorxiv.org
The discovery of a drug requires over a decade of enormous research and financial investments—and still has a high risk of failure. To reduce this burden, we developed the NICEdrug.ch database, which...
It feels weird to be happy about science now, when it is time to fight for deep social changes... But I am very enthusiastic to present the product of years of work... https://t.co/kA57x96LWT ( https://t.co/IhaY1z1QfZ):
https://t.co/5r9RyLaXKK 1/9
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Today was our project's 18 month review meeting! We met with members of the @EU_Commission via Zoom to present our work so far. Give our website a visit to find out what we've been up to➡️ https://t.co/oturzNbJ5i 🦠🧪🌿 #Horizon2020 #biotech #synbio #bioeconomy
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Updated ATLAS of biochemistry, a repository of ~150k possible biochemical reactions, allows the user to search for all the possible pathways from any substrate to any product, involving known and novel enzymatic steps! @Vassily_13 @pacmen_itn On the cover ACS Synthetic Biology!!
Congrats to Jasmin, @HomaMP4, Anastasia, Alan and @Vassily_13 to make it to the cover of the latest: ACS Synthetic Biology | Vol 9, No 6 https://t.co/a8Lci9DU6l
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